Corallococcus macrosporus HW-1: LILAB_24415
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Entry
LILAB_24415 CDS
T01558
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LILAB_24415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfu03021
]
LILAB_24415
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_24415
Enzymes [BR:
mfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LILAB_24415
Transcription machinery [BR:
mfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LILAB_24415
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LILAB_24415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEI66778
UniProt:
F8CRN0
LinkDB
All DBs
Position
5780906..5781928
Genome browser
AA seq
340 aa
AA seq
DB search
MADTFVAKNWRDLIKPRRMEVDQDSATPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAITTVKIEGVDHEFTTIPEVSEDVTDVVLNLKEVLLRMHTNETKTLRIEAEGPKEVKAG
DIITDPDTEILNPGHHICTISEGGKLRMELTCRRGRGYTPANANKVAGSPIGTIPIDSLF
SPIRKVNYQVTNARVGQVTDYDKLSLEVWTDGSVSPQDAVAYAAKIIKEQLTVFVNFDET
EEPVVAEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKSIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKQAPAPAAPKA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgtttgttgcgaagaactggcgtgacctgatcaagccccgccgcatggag
gtggatcaggacagcgcgacccccacctacggcaagttcgtcgcggagccgctcgagcgc
ggcttcggtacgacgctgggcaattcgctccgccgggtgctgctgtcgtcgctgcagggc
gccgccatcaccaccgtgaagattgaaggcgtggaccacgagttcacgaccatccccgag
gtgtccgaggacgtcacggacgtcgttctgaacctgaaggaagtcctccttcggatgcac
acgaacgagacgaagacgctgcgcatcgaggcggagggccccaaggaggtcaaggccggt
gacatcatcaccgacccggacacggagatcctcaacccgggccaccacatctgcaccatc
tccgagggtggcaagctccgcatggagctgacgtgccgccgcggccgtggctacacgccg
gccaacgcgaacaaggtcgcaggttcgcccatcggcaccatccccatcgactcgctgttc
tcgcccatccgcaaggtgaactaccaggtcaccaacgcgcgcgtcggtcaggtgacggac
tacgacaagctgtcgctcgaggtctggacggacggctccgtgtccccgcaggacgcggtg
gcgtacgcggcgaagatcatcaaggagcagctcaccgtcttcgtgaacttcgacgagacg
gaggagcccgtcgtcgccgaggcgccgaaggaagaggcgaagctcaacgagaacctgttc
cgctcggtggatgagctcgagctgtcggtccgctcggcgaactgcctgcagcaggcgaac
atcaagtccattggcgacctcgtgcagcgcaccgaggccgagatgctcaagacgaagaac
ttcggccgcaagtctctgaaggagatcaaggagatcctcgcggagatgggcctgtcgctg
ggcatgaagctggagaactggccgccgaagcaggcgccggctcccgcggcgccgaaggcg
tag
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integrated database retrieval system
