Corallococcus macrosporus HW-1: LILAB_27890
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Entry
LILAB_27890 CDS
T01558
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfu03016
]
LILAB_27890
Enzymes [BR:
mfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LILAB_27890
Transfer RNA biogenesis [BR:
mfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LILAB_27890
Prokaryotic type
LILAB_27890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEI67465
UniProt:
F8CGB3
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All DBs
Position
6742804..6744408
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AA seq
534 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVDSGRHRVYLMDKQKLSTFDAVTRLRDAFGLKPGAISYCG
LKDKQGRTEQIIAVDGADVDMQDPDLRLKYLGRTDKPLSAANITSNRFSVTVRALQHASL
GPLNVAAAEVNRLGVINYFDSQRFGSLKHGQGFIAKDLIRGDFEAALHNYMAKPSELDRT
EDAKIKAFWKENWGRWDARVPYEGTRKYHRVLKSLRDQPGDYLRAFMQIDADYRAMLLFT
YQSFLWNEGVRRYLQLMLPREHLFPMRYQAGTLLFHRDASPEVLRTLRDATFPLLAPNST
FSDPKVEEAVRWVLGREKLRLEDLSIPGAERRLYFKHEERPLLSFPHKLVVGRTMPDELN
RDAIKVNVAFTLPPGAYATLVIKRLFHFEYAEDSAETIRASQRPKLAEAEAEAAAQLPSS
RRGPPRRDGSGARQAGDSRRGAGDREPRGTGAPGRRRAGPREVELLEPVSGRARTLAAKA
PEARPAEPTPPLGFRERQRQRKDARSVARAETEARRTAKARPSAKAKPPKSRKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaaacaaaagcccgaggacttctccgtcaaggagtcataccgtttcgacgaa
gtcgactcgggacgtcaccgcgtctacctgatggacaagcagaagctgtccaccttcgac
gccgtgacgcggctgcgggacgcgttcgggctcaagccgggggccatcagctactgcggc
ctcaaggacaagcagggccggaccgagcagatcatcgcggtggacggcgccgacgtggac
atgcaggaccccgacctgcgcctgaagtacctgggccgcacggacaagccgctgtccgcc
gccaacatcacgtccaaccgcttctccgtcacggtgcgcgcgctccagcacgcgtcgctg
gggcccctcaacgtggccgccgccgaggtcaaccgcctgggcgtcatcaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggacctcatccgg
ggcgacttcgaggccgcgctgcacaactacatggccaagccgtccgagctggaccggacg
gaggacgccaagatcaaggccttctggaaggagaactggggccgctgggacgcgcgcgtc
ccctacgagggcacgcgcaagtaccaccgcgtcctcaagtccctgcgcgaccagcccggg
gactacctgcgcgccttcatgcagatcgacgcggactaccgcgccatgctgctcttcacc
taccagagcttcctctggaacgagggcgtgcggcgctacctccagttgatgctgccgcgc
gagcacctcttccccatgcgctaccaggccggcacgctgctgttccaccgcgacgccagc
ccggaggtgctccgcacgctgcgcgacgccaccttccccctgctggcgcccaactccacg
ttcagcgacccgaaggtggaggaggccgtgcgctgggtgctgggccgcgagaagctccgc
ctggaggacctgagcatccccggcgccgagcgccggctctacttcaagcacgaggagcgg
cccctgctgtcgttcccgcacaagctcgtggtgggccgcacgatgccggacgagctcaac
cgggacgccatcaaggtcaacgtcgccttcaccctgccgccgggcgcctacgccaccctg
gtcatcaagcggctgttccacttcgagtacgccgaggacagcgcggagaccatccgcgcc
tcgcagcggccgaagctggcggaggccgaggcagaggccgccgcgcagctcccctccagc
cgccggggtcctccccgccgggacgggagcggcgcgcgccaggcgggcgacagccgccgg
ggcgccggagaccgcgagccccgaggcacgggcgccccgggccgccgccgcgccggcccc
cgggaggtggagctgctggagcccgtctccggccgcgcccggacgctcgccgccaaggcc
cccgaggccaggccggcggagcccaccccgccgctgggcttccgggaacggcagcgccag
cgcaaggacgcccggtcggtcgcccgcgcggagaccgaggcccggcggacggccaaggcc
aggcccagcgccaaggccaagccgccgaaatcacggaagaaataa
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