Corallococcus macrosporus HW-1: LILAB_31385
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Entry
LILAB_31385 CDS
T01558
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03410
Base excision repair
mfu03430
Mismatch repair
mfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LILAB_31385
03430 Mismatch repair
LILAB_31385
03440 Homologous recombination
LILAB_31385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_31385
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LILAB_31385
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LILAB_31385
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LILAB_31385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AEI68158
UniProt:
F8C737
LinkDB
All DBs
Position
complement(7718269..7719972)
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AA seq
567 aa
AA seq
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MLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFRMKGMPA
GVDRLIRAIRSREKVTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEGYGLNVN
AVERIAAEGTRVLVTLDCGITSVAEITRARELGLDVLVVDHHTVPPTLPPAVAVLNPHQP
GCEYPTKALCAAGVAFNFCMGLRKRLRDEGFFASRKEPNLRALMDLVALATVADVVPLTG
ANRILVSHGLQELSAARRPGVRALKEVAGLDPDASVTAGQVGFRLGPRINAAGRLHDASL
GLQLLCSESPETARSLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLYDEGWHP
GVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSIEAFHLHDALSGCAELLTRFGGHKHA
AGLTIDADRLPAFREAFEKIAHQRLTPEDLIPRCRVDAVVNPHELDAHAVESLQRLGPFG
QGNPEPVLVLRRQVARPRVLQPKSGSGSGHLKLALMDAPELDAIGFNMADRATLVDGPVD
LAFQAGFDTFRGQRKLSLRLKDLRVAA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttgcttccagatgtggtcgagcaggaggtggcgtccctcgcgggagagctgtcactgcac
ccgctcgcggcgaaggtgctgctgcaccgtggctaccgcaccccggagtccgcgtcggcg
ttcctgtccgaccggctcgcggacctgccggacccgttccggatgaaggggatgccggcg
ggggtggaccgcctcatccgcgcgattcgctcgcgggagaaggtgacgctctacggcgac
tacgacgtggacggcgtctgctccacgtcgctgctctacctcttcatgaaggagctgggc
gcgccgcccgccacgtacatcccccaccggttggatgagggctacggcctcaacgtcaac
gcggtggagcgcatcgccgcggagggcacgcgggtgctggtgacgctggactgcggcatc
acctcggtggcggagattacccgcgccagggagctgggcctggacgtgctggtggtggac
caccacacggtgccgcccacgctgccgcccgcggtggcggtgctcaacccgcaccagccc
ggctgcgagtacccgacgaaggcgctgtgcgccgcgggcgtggccttcaacttctgcatg
ggcctccgcaagcgcctgcgcgacgagggcttcttcgccagccgcaaggagcccaacctg
cgcgccctgatggacctggtggcgctggccacggtggcggacgtggtgccgctcaccggc
gccaaccgcatcctggtgtcccacggcctccaggagctgagcgcggcccgccgtccgggc
gtgcgcgccttgaaggaggtggcgggcctggacccggacgcctccgtcaccgcgggccag
gtgggcttccgcctggggccccgcatcaacgcggcgggccggctccatgacgcctcgctg
ggcctccagttgctgtgctcggagtcgccagagacggcgcgctcgctggccgcggtgttg
gaccgcgccaacgcggagcgccagggcatcgagagcagcatcctgacgcaggcgctggcc
caggcggagtcgctgaaggacgcgcgcggcctggtgctctacgacgagggctggcacccg
ggcgtcatcggcatcgtcgcctcgcgcgtggtggagcgcttctaccggcccaccgtcatg
gtgggggtgaaggacggcgtggggaagggctcggcgcgcagcatcgaggccttccacctc
cacgacgcgctcagtggctgcgcggagctgctgacgcgctttggtggccacaagcacgcc
gcggggctcaccatcgacgcggaccggctgcccgccttccgggaggccttcgagaagatt
gcccaccagcgcctgacgccggaggacctgattccgcgctgccgcgtggacgcggtggtg
aacccccacgagctggacgcgcacgccgtggagtcgctccagcggctggggcccttcggc
cagggcaacccggagcccgtgctggtgctgcgccggcaggtggcccgcccgcgcgtgctg
cagcccaagtccggcagcggcagcggacacctcaagctggccctgatggacgcgccggag
ctggacgccattggcttcaacatggcggaccgggccacgctggtggatggcccggtggac
ctggccttccaggccggcttcgacaccttccgaggccagcggaagctgtccctgcggctc
aaggacctgcgcgtggccgcctag
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