Corallococcus macrosporus HW-1: LILAB_32840
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Entry
LILAB_32840 CDS
T01558
Name
(GenBank) sigma-54 dependent transcriptional regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfu03000
]
LILAB_32840
Transcription factors [BR:
mfu03000
]
Prokaryotic type
Other transcription factors
Others
LILAB_32840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
AAA_22
NACHT
T2SSE
ATPase_2
AAA_19
AAA_30
ABC_tran
AAA_7
AAA_29
AAA_2
AAA_18
TniB
AAA_33
MCM
AAA_14
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEI68449
UniProt:
F8CCB5
LinkDB
All DBs
Position
8086508..8088097
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AA seq
529 aa
AA seq
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MLGTTLDNGQGPQRWARWRPTVALCQQEDLLVHRLELLHPPNAAALVATLEQDIQQVSPE
TEVRATPLDLRNPWDLEETYGALLDYVRGYAFNPEAEDYLVHITTGTHIAQICMFLLVES
RLIPGRLVQVSPDPRDRAGAGTHTLIDLDLSRYDTLAARFRQEQREGLAFLKSGIDTRNA
AFNRLIERIEQVAVQSRAPLLITGPTGAGKSQLARRIYALKKARRGVAGPFVDLNCATLR
GDGAMSALFGHVKGAFTGALSDRPGLLRQANGGVLFLDEIGELGADEQAMLLRALEDKRF
LPVGADREVASDFQLIAGTNRDLQVEVERGRFREDLLARINLWTFRLPALRERPEDIAPN
LRFELDQSSEAVGTRVTMNKEAQARFLGFATSPEARWSGNFRDLNAAVLRMATLAAGGRI
TRDVVDEELERLREQWRPSGAKAATVTTDLVAELLGERLASELDRFDRVQLADVLSVCRA
SRSLSDAGRVLFAQSRAQKKSVNDADRLKKYLARFGLTWADLSGQGAAP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggacgacgctggacaacggtcaggggccgcagcgctgggcgcggtggcggccc
acggtggcgctgtgccagcaggaggacctgctggtgcaccggctggagctgctgcacccg
ccgaacgcggcggcgctcgtggccacgctggagcaggacatccagcaggtgtcaccggag
acggaggtgcgggccacgcccctggacctccggaacccgtgggacctggaggagacctac
ggcgcgctgctcgactacgtgcgcggctatgccttcaaccccgaggcggaggactacctg
gtccacatcaccacgggcacgcacatcgcgcagatctgcatgttcctgctggtggagagc
cggctcatccccggcaggctggtgcaggtgtcacccgaccccagggaccgcgcgggcgcg
ggcacgcacacgctcatcgacctggacctgtcgcggtacgacacgctggcggcgcgcttc
cggcaggagcagcgtgaaggcctggccttcctcaagtccggcatcgacacccgcaacgcc
gcgttcaaccgcctcatcgagcgcatcgaacaggtggccgtccagtcccgggcgcccctg
ctcatcaccgggcccacgggggcgggcaagtcgcagctcgcgcgccgcatctacgccctg
aagaaggcccggcgcggcgtggcgggccccttcgtggacctcaactgcgccacgctccgg
ggcgacggcgccatgtccgccctcttcggccacgtgaagggcgccttcacgggcgcgctg
agcgacaggcccggcctgctgcggcaggcgaatggcggggtgctgttcctggacgaaatc
ggagagctgggcgcggacgagcaggccatgctgctgcgcgcgctggaggacaagcgcttc
ctgcccgtgggcgcggaccgcgaggtggcgagcgacttccagctcatcgccggcaccaat
cgcgacctccaggtggaggtcgaacgtgggcgcttccgcgaggacctgctcgcgcgcatc
aacctgtggaccttccggctccccgcgctgcgcgagcgcccggaggacatcgcccccaac
ctgcgcttcgagctggaccagtcctccgaggccgtgggcacgcgcgtcacgatgaacaag
gaggcccaggcgcgcttcctcggcttcgccacgtctcccgaggcgcggtggtccggcaac
ttccgcgacctcaacgccgcggtgctgcgcatggccacgctcgcggccggcggacggatt
acccgggacgtggtggacgaggagctcgaacggctgcgcgagcagtggcgcccctccggc
gcgaaggcagccacggtgacaacggacctggtcgcggagctgctgggagagcgtctcgcc
agcgagctggaccgcttcgaccgggtccagctcgcggacgtgctgagcgtctgccgggcg
tcacgctcgctgtcggacgccgggcgtgtgctgttcgcccagtcacgcgcccagaagaag
agcgtcaacgacgcggaccggctgaagaagtacctggcccgcttcggcctcacctgggcg
gacctcagcgggcaaggcgccgcgccttga
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