Corallococcus macrosporus HW-1: LILAB_33895
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Entry
LILAB_33895 CDS
T01558
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mfu
Corallococcus macrosporus HW-1
Pathway
mfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LILAB_33895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfu03400
]
LILAB_33895
Enzymes [BR:
mfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LILAB_33895
DNA repair and recombination proteins [BR:
mfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LILAB_33895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AEI68660
UniProt:
F8CGC5
LinkDB
All DBs
Position
complement(8342902..8343672)
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AA seq
256 aa
AA seq
DB search
MKIATWNVNSVRARQERLLAWLKKAQPDVLCLQELKCVDEDFPMEAVRELGYHAAVHGQK
TYNGVAILAKEEPKDVVKGLSDGVDDSHARLIAATVGGIRVVSAYAPNGQSVDSPQYQYK
LEWYGRLRRYLDARHKPDEPLVLGGDWNVAPEDLDTYDPKLWEGQTLFTLKERDALQHLG
AFGLSDAFRKLHPGVQKFTWWDYRMLGFPKNLGLRIDHLYVTAPLAERLTVVDVDREERK
GKQPSDHAPVWLELRD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaacgtgaactcggtgcgagcccggcaggagcggctgctcgcc
tggttgaagaaggcccagccggacgtcctctgcctgcaggagctcaagtgcgtggacgag
gacttccccatggaggccgtgcgcgagctgggctaccacgccgcggtccacgggcagaag
acgtacaacggcgtcgccatcctcgcgaaggaggagccgaaggacgtggtgaagggcctg
tccgacggcgtggatgattcacatgcgcgcctcatcgcggccacggtggggggcatccgc
gtggtgagcgcgtacgcgcccaacggccagtcggtggactcgccgcagtaccagtacaag
ctggagtggtacggccggctgcggcgctacctggacgcgcggcacaagcccgacgagccc
ctggtgctgggcggcgactggaacgtggcgcccgaggacctcgacacgtacgacccgaag
ctgtgggagggccagacgctcttcacgctgaaggagcgggacgcgctccagcacctgggc
gccttcgggctgtcggatgccttccgcaagctgcacccgggcgtgcagaagttcacctgg
tgggactaccgcatgctcggcttcccgaagaacctgggcctgcgcatcgaccacctctac
gtcacggcccccctggccgagcggctgacggtggtggacgtggaccgcgaggagcgcaag
ggcaagcagccctcggaccacgcgcccgtgtggctcgagctgcgcgactga
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