Methylobacterium fujisawaense: ABC766_05410
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Entry
ABC766_05410 CDS
T10654
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfuj Methylobacterium fujisawaense
Brite
KEGG Orthology (KO) [BR:
mfuj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfuj03032
]
ABC766_05410
03400 DNA repair and recombination proteins [BR:
mfuj03400
]
ABC766_05410
Enzymes [BR:
mfuj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABC766_05410
DNA replication proteins [BR:
mfuj03032
]
Prokaryotic type
DNA Topoisomerases
ABC766_05410
DNA repair and recombination proteins [BR:
mfuj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABC766_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XAP11158
LinkDB
All DBs
Position
1140471..1141724
Genome browser
AA seq
417 aa
AA seq
DB search
MVGVETAENGGDLRAAAAEAGLVYVDDGRPGLSRRRSGSGFRYLDAKGAPVRDKAKLARI
RALAIPPAYTDVWICPRSNGHIQATGRDAKGRKQYRYHPDFRQAREANKFSRIMAFADAL
PGIRRRVDADMKRPGLPREKVLATVVHLLETTLIRVGNDDYARTNKSYGLTTLRDPHVRI
AGSALSFRFKGKSGKIWDVSLKDRRVARIVKACQDLPGQELFQYLDPDGTQRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFESFDSEAGAKRNIRAAIESVAGRLGNTP
TICRKCYIHPQILDCYLEGDLLLQVKGAVESELSEDLSRLRPEEAAVLGLLQARLSAAGD
SVRAGARVKPAGTRMRSSKKPRDKVAAPTTGSKTSGMAETAPKAKRASRVRRKAAAA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtgtcgagacggcggaaaacggcggagacctccgtgcggcggcggcggaggcc
ggcctcgtctacgtcgatgatggccggccgggcctgtcgcgccgccgcagcggctccggc
ttccgctacctcgacgcgaagggcgccccggtgcgcgacaaggcgaagctcgcccgcatc
cgcgcgctggcgatccctccggcctacacggatgtctggatctgcccccgcagcaacggc
cacatccaggcgaccggccgcgatgccaagggccgcaagcagtaccgctaccacccggat
ttccggcaggcgcgagaggccaacaagttctcgcggatcatggccttcgcggacgccctg
ccgggcatccgccggcgggtcgatgccgacatgaagcggccgggcctgccccgcgagaag
gtgctggccaccgtggtccacctgctcgagaccacgctgatccgcgtcggcaacgacgat
tacgcgcggaccaacaagagctacggcctgacgaccctgcgcgatccccatgtgcggatc
gcgggttcggccctgtcgttccggttcaagggcaagagcggcaagatctgggacgtgtcg
ctgaaggaccggcgcgtcgcccggatcgtgaaggcctgccaggacctgcctggacaggag
ctgttccagtacctcgatccggacggcacgcagcgcgacgtcacctcctcggacgtgaac
gcgtatctgcgggagatcaccggcgaggacttcaccgccaaggacttccggacctgggcc
ggtacggtgctggcggcgctggcgctgcgcgagttcgaaagcttcgacagcgaggcgggg
gccaagcgcaacatccgcgcggccatcgagagcgtcgccggccgcctcggaaacaccccg
acgatctgccgcaagtgctacatccacccgcagatcctcgactgctatctggagggtgac
ctgctcctgcaggtgaagggcgcggtcgagtccgagctgagcgaggatctctcgcggctg
cggccggaggaggcggcggtgctggggctgctccaggcgcggctgtccgcggccggggat
agcgtccgggccggggcgcgggtcaagccggcgggaacgcgcatgcggagctctaagaag
ccgcgggataaggttgcggcgccgacgaccggttccaagacgtccggcatggccgagacc
gcgccgaaggccaaacgggcctcccgggtccgcaggaaggctgcggctgcttag
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