Methylobacterium fujisawaense: ABC766_20210
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Entry
ABC766_20210 CDS
T10654
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mfuj Methylobacterium fujisawaense
Pathway
mfuj03020
RNA polymerase
Brite
Enzymes [BR:
mfuj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABC766_20210 (rpoC)
Transcription machinery [BR:
mfuj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABC766_20210 (rpoC)
DNA repair and recombination proteins [BR:
mfuj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABC766_20210 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAP08064
LinkDB
All DBs
Position
4249453..4253661
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNQQATPVSFDQIKISISSPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRDRMGHIELAAPVAHIWFLKS
LPSRIGLLLDMALKDLERILYFESYCVIEPGLTPLKERQLLSEEEYLRAQEEYGEDSFTA
MIGAEAIRRILQELDLDKIANDLREEIAVTTSELKPKKLLKRLKIIEAFQMSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSIVAEGMPGEFKADNAKNPMQGVYG
DMGELEHALAAKAVSLHTKIKWRWTGIGPDNQPLTKTYETTPGRVILSGALPKHAKVPFE
VVNKLMTKKEISAMIDTVYRHCGQKESVIFCDRIMALGFNHAFKAGISFGKDDMVVPENK
WSIVDTTRALVKDYEQQYNDGLITQGEKYNKVVDAWAKCSDKLAAEMMGRISAVQKDEHG
ADKQINSIYMMSHSGARGSPAQMKQLAAMRGLMAKPSGEIIETPIISNFKEGLDVLEYFN
STHGARKGLADTALKTANSGYLTRRLVDVAQDAVIREVDCGTTNGIKMRAIVDAGQVVAT
LATRILGRATAEDLVAADGTVIVKTGETIEERHLPAINAAGIQEVKIRSVLVCATKSGVC
ATCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADSSFIESSFEG
TIKIRNRAVAKNTDGDLIATGRNVAVVIVGSDGVERAVHRLQYGAKLRVDEGDKIKRGQR
IAEWDPYTRPILTEVDGLVAYEDLVDGQSMTETTDESTGIAKRVVVDWRGSARTSDLKPA
MVVVDREGKALKLPRGSDARYFLPVDAIIGFDPGATVKAGDILARVSTDSAKTRDITGGL
PRVAELFEARRPKDAAIIAEKSGTIAFGRDYKNKRRLTLTPHDGSEAVEYLIPKGKHIHL
QDGDVVELGDYIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVSINDKHIEVIVR
QMLQKVEVTDGGDSDILSGDQIDRTELTEFNEKLLAEGKKPIQGVPVLLGITKASLQTKS
FISAASFQETTRVLTEAAVNGKVDTLEGLKENVIVGSLIPAGTGSMVADIRSIARRRDAM
ILQQKQTESGAMPVEELPPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaaccttttcaaccagcaggccacgccggtcagcttcgatcag
atcaagatctcgatctcgtccccggagaagatcctctcctggtcgtacggcgagatcaag
aagcccgagaccatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgcg
cgcatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgtgagaagtgcggcgtcgaggtcaccctcgcgcgcgtccggcgc
gaccgcatgggccatatcgagctggccgcccccgtcgcgcatatctggttcctgaagtcg
ctgccctcgcgcatcggcctgctgctcgacatggccctcaaggacctcgagcggatcctg
tacttcgagtcctactgcgtcatcgagccgggcctcacccccctgaaggagcgtcagctc
ctgtcggaggaggagtacctgcgcgcccaggaggagtacggcgaggacagcttcaccgcc
atgatcggcgccgaggccatccggcgcatcctgcaggagctcgacctcgacaagatcgcc
aacgatctgcgcgaggagatcgcggtcacgacgtcggagctgaagcccaagaagctcctg
aagcggctcaagatcatcgaggccttccagatgtccggcaacaagccggaatggatgatc
ctcacggtcgtcccggtgatcccgccggacctgcgcccgctggtcccgctggacggcggc
cgcttcgcgacctccgacctcaacgacctgtaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgcccgacatcatcatccgcaacgagaagcggatg
ctgcaggaggcggtcgacgccctgttcgacaacggccgccgcggccgcgtcatcacgggc
gccaacaagcgtccgctgaagtcgctcgccgacatgctgaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgattattcgggccgctcggtcatcgtggtcggc
ccggagctgaagctgcaccagtgcggtctgcccaagaagatggcgctggagctgttcaag
ccgttcatctacgcgcgcctcgacgccaagggcttctcggccaccgtcaagcaggccaag
aagctggtcgaaaaggagaagccggaggtctgggacatcctcgatgaggtgatccgcgag
cacccggtgatgctgaaccgcgcgccgacgctacaccgcctcggcatccaggccttcgag
ccgaagctgatcgagggcaaggcgatccagctgcacccgctggtctgcgccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcatgtcccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctcatgatgtcgaccaacaacatcctgcacccggccaacggtcagccg
atcatcgtgccgtcgcaggacatcgtgctcggcctctactacctgtcgatcgtggccgag
ggcatgccgggcgagttcaaggcggacaacgccaagaacccgatgcagggcgtctacggc
gacatgggcgagctggagcacgccctggccgccaaggccgtgtcgctgcacaccaagatc
aagtggcgctggaccggcatcggcccggacaatcagccgctgaccaagacctacgagacc
acgcccggccgggtgatcctgtccggtgctctgccgaagcacgccaaggtgcccttcgag
gtcgtcaacaagttgatgaccaagaaggagatctcggcgatgatcgacaccgtctaccgc
cactgcggtcagaaggagtcggtgatcttctgtgaccggatcatggcgctcggcttcaac
cacgcgttcaaggccggcatctccttcggcaaggacgacatggtcgtgccggagaacaag
tggtcgatcgtcgacacgacccgcgcgctcgtgaaggactacgagcagcagtacaacgac
ggcctgatcacgcagggcgagaagtacaacaaggtggtggatgcctgggccaagtgctcg
gacaagctggccgccgagatgatgggccgcatctccgcggtccagaaggacgagcacggc
gccgacaagcagatcaactcgatctacatgatgagccactccggcgcccgtggttcgccc
gcccagatgaagcagctcgcggcgatgcgcggcctcatggccaagccgtcgggcgagatc
atcgagaccccgatcatctcgaacttcaaggaaggcctggacgttctggagtacttcaac
tccacgcacggtgcccgtaagggcctggccgacaccgccctgaagaccgccaactccggc
tacctgacccgccgcctcgtcgacgtggcgcaggacgccgtcatccgcgaggtggattgc
ggcacgaccaacggcatcaagatgcgcgccatcgtggatgccggtcaggtcgtggcgacg
ctcgccacccgcatcctgggccgcgccacggccgaggatctcgtggccgcggacggcacg
gtgatcgtcaagaccggcgagaccatcgaggagcggcacctgccggcgatcaacgccgcc
ggcatccaggaggtgaagatccgctcggtgctcgtctgcgccaccaagagcggcgtctgc
gccacctgctacgggcgcgacctcgcccgcggcacgcccgtcaacatgggcgaggccgtc
ggcgtcatcgcggcccagtcgatcggcgagccgggcacgcagctcacgatgcgcaccttc
cacatcggtggtgcggcccagatcgccgactcgtccttcatcgagtcgagcttcgaaggc
acgatcaagatccgcaaccgcgccgtcgccaagaacacggacggggacctgatcgccacc
ggccgcaacgtggcggtcgtgatcgtggggtcggacggcgtcgagcgggcggtccaccgc
ctgcaatacggcgccaagctccgggtcgacgagggtgacaagatcaagcgcgggcagcgg
atcgccgagtgggatccctacacccgtccgatcctcaccgaggtcgacggcctcgtggcc
tacgaggatctggtcgacggccagtccatgaccgagaccaccgacgagtcgaccggcatc
gccaagcgcgtcgtcgtcgactggcgcggctcggcccggacctcggacctgaagcccgcg
atggtcgtggtcgatcgggagggcaaggcgctcaagctgccgcgcggctcggacgcccgc
tacttcctgccggtcgacgccatcatcggcttcgatccgggcgcgacggtcaaggccggc
gacatcctggcccgcgtctcgaccgactcggccaagacccgcgacatcaccggcggtctg
ccgcgggtggcggagctgttcgaggcacggcgcccgaaggacgcggcgatcatcgccgag
aagtcgggcaccatcgcgttcggccgcgactacaagaacaagcgtcggctcacgctgacg
ccgcatgacggctcggaggcggtcgagtacctgatcccgaagggcaagcacatccacctg
caggacggggacgtggtggagctcggcgactacatcgtcgacggaaacccggctccgcac
gacatcctggcgatcaagggcgtcgaggaactcgccgcctacctcgtcaacgagatccag
gaggtctaccggctgcagggcgtgtcgatcaacgacaagcacatcgaggtgatcgttcgt
cagatgctgcagaaggtcgaggtgaccgatggcggcgactcggacatcctctcgggcgac
cagatcgaccggacggagctgaccgagttcaacgagaagctgctcgccgagggcaagaag
ccgatccagggcgttccggtcctgctcggcatcaccaaggcgtcgctgcagacgaagtcg
ttcatctcggcggcctcgttccaggagaccacccgcgtcctcaccgaggcggcggtcaac
ggcaaggtcgacaccctggaaggcctgaaggagaacgtgatcgtcggatcgctgatcccg
gccggcaccgggtcgatggtggcggacatccgctccatcgcccgccgccgcgacgcgatg
atcctgcagcagaagcagaccgagagcggcgcgatgccggtcgaggagcttccgcccgcc
gccgaataa
DBGET
integrated database retrieval system
