Megamonas funiformis: GXM21_04090
Help
Entry
GXM21_04090 CDS
T06475
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfun
Megamonas funiformis
Pathway
mfun03420
Nucleotide excision repair
mfun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXM21_04090 (pcrA)
03430 Mismatch repair
GXM21_04090 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_04090 (pcrA)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM21_04090 (pcrA)
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXM21_04090 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GXM21_04090 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIB59594
LinkDB
All DBs
Position
833956..836241
Genome browser
AA seq
761 aa
AA seq
DB search
MNIYDGLNPAQAQAVAHTEGPLLIMAGAGSGKTKVLTCRIANLLDKGVSPYNILAITFTN
KAATEMRERVDRMIGEKAKYVWLSTFHSFCTKFLRFEIEALGIYKKNFVIYDTQDALTLI
KNCLKELNLDEKQYAPYAVQSAISNAKNMMTTPQEYTQSASDFFAKKIAEIYTMYQANLI
ENNALDFDDLLMLAVKVLKEHEDIKMKYQQRFQYILVDEYQDTNGAQYQLTSLLAGMYRN
LCVVGDADQSIYGWRGADIRNIMDFEKDYPEATVIKLEQNYRSTKTILNAANMVIEHNLD
RKPKKLWTNNPQGEKIIHYTASDERDEARFITEEAVKQKTLFNVSYGDMAVLYRTNAQSR
ALEEGFMKAGVPYTMVGGLKFYDRKEIKDILAYLRVIYNPEDTISLMRIINVPKRSLGVV
TMNKLAEFADMYNMTLFDAISAPETAPITPKAKQSLANFAEFILEMLNNSVVLSVHDLIE
QVMHKSGYIAELEKENTVENQTRLENIKELLSVAKDFEKTNEEPTLENFLSTVSLVSDID
NADMEDERVTLMTMHSAKGLEFPVVFLAGMEEGLFPHARTLMNETEIEEERRTCYVGITR
AERKLYITNAKARMIYGKTLSYEPSRFISEIPAEYLEEREAKNKFGFGMGSMNSYGSGYS
QSGRNNFGGSILGNNNSTGRPNSLLGGGFAQKAQAVKPAGNVIRPDLSIKWKVGDKAKHN
KWGIGTIVSVKGTGEEIELKIAFPGQGIKALMQKYAPISKV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatatatgatggtttaaatccagcacaagctcaagctgtagctcatacagaaggg
cctcttcttatcatggcaggagcaggttctggaaaaacgaaagtattgacttgtagaata
gctaatttattagataaaggagtatctccatataatattttggcgataacttttacaaat
aaagctgcgacagaaatgcgtgaacgtgtagatagaatgattggcgaaaaagcaaaatat
gtttggctaagcacatttcattcattttgtactaaatttttgcgttttgaaatcgaagct
ttaggtatttataagaagaattttgtcatctatgatacacaagatgctttgactttgata
aaaaattgtttaaaagaattaaatcttgatgaaaaacaatatgcaccatatgcagtacag
tcagctatttccaatgctaaaaatatgatgacaactccacaagagtatacacaatcagca
agtgatttttttgctaaaaaaattgcagaaatttacactatgtatcaagcgaatttaatc
gaaaataatgctttagattttgatgatttattgatgcttgcagttaaagttttaaaagaa
catgaagatataaaaatgaaatatcaacagcgtttccaatatattttagttgatgagtat
caagatacaaatggggctcaatatcaattgacttcacttttagctggaatgtatcgcaat
ctttgcgtcgtaggtgatgcagatcaatctatttatggctggcgtggtgctgatatcaga
aatatcatggattttgaaaaagattatcctgaagctacagttataaaattggaacaaaat
tatcgttcaacaaaaactattttaaatgctgctaatatggttattgaacataatcttgac
cgtaaacccaaaaaattatggacgaataatcctcaaggtgaaaaaataattcattatacg
gcaagtgatgaacgtgatgaagctagatttatcacagaagaagctgtaaaacaaaaaaca
ttattcaatgtatcttatggagatatggcagtattatatcgtacaaatgctcaatctcgt
gcattagaagaaggtttcatgaaagctggcgttccttatactatggttggcggattgaaa
ttctatgatagaaaagaaattaaagatattttagcttatttgagagttatttataatcca
gaagatacaataagtttaatgcgtataatcaatgtgcctaagcgttcattaggtgttgta
actatgaataaattagctgaatttgctgatatgtacaatatgactttatttgatgctata
tctgctccagaaacggcaccaatcacaccaaaagcaaaacaatctttggctaattttgct
gaatttatcttagaaatgttgaataattcagtggtattatcagttcatgatttaattgaa
caagtaatgcataaatctggatatattgctgaattagaaaaagaaaatacagtcgaaaat
cagactcgtttagaaaatatcaaagaattattgagtgtagcgaaagattttgaaaagaca
aatgaagaaccaactttggaaaactttttaagtacagtgtctttagtatctgatattgat
aatgcagatatggaagatgagagagttacgcttatgactatgcattcagctaaaggatta
gagtttccagtggtatttttagctggcatggaagaaggattatttccacatgctagaact
ttgatgaatgaaactgaaattgaagaagaacgtcgtacttgttatgtaggtataactaga
gctgagcgaaaattatatattacaaatgcaaaagctcgtatgatttatggcaaaacatta
tcgtatgaaccttcacgatttattagtgaaattcctgcggaatatttagaagaacgtgag
gcaaaaaataaatttggttttggcatgggcagtatgaatagttatggctcaggatatagt
caaagtggtagaaataattttggtggaagtattttaggtaataataattctacaggcaga
ccaaattcacttttaggtggaggttttgcccaaaaagcacaagcagttaaaccagcaggt
aatgtaattcgtccagatttatccataaaatggaaagtcggtgataaggctaaacataat
aaatggggaattggtacaattgtatctgtaaaaggaactggtgaagaaatagaattgaaa
atagcttttccaggtcaaggcataaaagctttgatgcaaaaatacgctcctatcagtaaa
gtataa
DBGET
integrated database retrieval system
