Megamonas funiformis: GXM21_04145
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Entry
GXM21_04145 CDS
T06475
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfun
Megamonas funiformis
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfun03032
]
GXM21_04145 (topA)
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_04145 (topA)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GXM21_04145 (topA)
DNA replication proteins [BR:
mfun03032
]
Prokaryotic type
DNA Topoisomerases
GXM21_04145 (topA)
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GXM21_04145 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
zf_Rg
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QIB59604
LinkDB
All DBs
Position
847189..849438
Genome browser
AA seq
749 aa
AA seq
DB search
MKKKTLVVVESPTKAKTIEKYLGNKKYTVMASMGHLRDLPKSQFGIDVENDFAPKYINIR
GKGDLIKSLKKEAKKSEKVYLASDPDREGEAIAWHLSHILGIDEHEKCRIVFNEITKPAI
QEAVKNPKEINIDRVDAQQARRMLDRIVGYKLSPLLWKKIRKGLSAGRVQSVTVKLICDR
EKEIQKFESEEYWTVDFKFKKKPRSSMFGAELVAIDDKKLMVSAKKEDVKIASKAQADEL
CSDIEKVTFKVTEIKKRQRHRKAPAPFTTSSLQQDAARKLGFTSRKTMMIAQQLYEGISL
GKKGPTGLITYMRTDSTRISEIALNEARNYIEENFGKEYLPEKPYIYAAGKSSQDAHEAV
RPTNIALSPATVEEYLSKEQLKLYKLIWQRFLGCQMLPASYDVMSVTIKGDKYLAKATGS
QLKFAGFTAVYNDSDNKKEKDVILPDLQEGDELSIQKLEAMQHFTEPPARYNDASLVKTL
EERGIGRPSTYAPIIETILARGYVVRSDKKFEPTDLGFVVVDLLEKYFKDIVDEKFTADL
ENKLDEIAVGKIQKNTLLEEFYGPFEKTLEHAEEEIGEVEVPDEVSDVQCELCGRMMVIK
QGRYGKFLACPGFPECRNTKPILKDTGVKCPKCGGKIIERRTRRGVVFYGCENYPQCDYV
SWDMPLTSNCKTCGSFLFRHRFKNGRTILYCSNDDCATRKEDTPINKEINKLKEKIQQQT
AKKLAELAQKEAQAQEENENKEHKEENKA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaacgcttgtagtagtagaatcgccaactaaagcaaagactattgaaaaa
tatttaggcaataaaaaatatacagtaatggcttctatgggacatcttcgcgatttacct
aaaagtcagtttggtatagatgtagaaaatgattttgcacctaaatatatcaatattcgt
ggcaagggagatttaattaaatctttaaagaaagaagctaaaaaatctgaaaaagtttat
ttagcctctgaccctgaccgtgaaggcgaagctattgcttggcatctatctcatatctta
gggattgatgaacatgaaaaatgtagaattgtattcaatgaaataacaaaacctgctatt
caagaagcagtaaaaaatcctaaagaaataaatattgatagagtagatgctcaacaagca
cgtcgtatgcttgaccgtattgtaggatataaattaagtccacttctttggaagaaaatt
cgcaaaggtttgagtgcagggcgtgtacaatcggtaacagtgaaattaatttgtgaccgt
gaaaaagaaattcaaaaatttgaatcagaagaatattggacagttgattttaaatttaag
aaaaaacctcgttctagtatgtttggagcagagctagtagctattgatgataaaaaattg
atggtttcagcgaaaaaagaagatgtaaaaattgcctctaaagctcaagctgatgaatta
tgcagtgatattgaaaaagttacttttaaagtaacagaaataaagaaacgtcaacgtcat
cgcaaagctccagcaccatttacgacaagtagtttacaacaagatgctgctagaaaatta
ggttttacttcacgtaaaacaatgatgatagctcaacagctttatgaaggtattagctta
ggtaaaaaagggccaactggtctgataacatatatgcgtacagactctacacgtatttca
gaaatagctttaaatgaagctagaaattatattgaagagaattttggtaaagaatatttg
ccagaaaaaccatatatttatgcagctggaaaatcttctcaagatgctcatgaagcagtg
cgtccaacaaatatcgctttaagtcctgccactgttgaagaatatttgagcaaagaacag
ttaaaactctataaattaatttggcaacgcttcttaggttgtcagatgttacctgctagt
tatgatgttatgagtgtaactattaaaggcgataagtatttagctaaagctactggttcg
caattaaaatttgcaggctttactgctgtatataatgatagcgataataaaaaagaaaaa
gatgtcatcttgccagatttgcaagaaggcgatgaattatctattcaaaaattagaagca
atgcaacattttacagaaccaccagctagatataatgatgcttctttagttaaaacttta
gaagaaagaggtattggtcgtccaagcacgtatgcaccaattattgaaactattttagct
agaggttatgtagttcgcagtgataaaaaatttgaaccaactgatttaggttttgtagta
gtagatttattggaaaaatattttaaagatattgttgatgagaaatttactgctgattta
gaaaataaattagatgaaatagcagtaggtaaaattcaaaaaaatactttgcttgaagaa
ttctatgggccatttgaaaaaactttagaacatgcagaagaagaaattggtgaagtagaa
gtgccagatgaagtttctgatgtacaatgcgaattatgtggtcgtatgatggtcataaaa
caaggtcgctatggtaaattcttagcatgtccaggttttccagaatgtagaaatacaaaa
cctattttgaaggatacaggtgttaaatgccctaaatgtggtggcaaaatcattgaacgc
cgtacacgtcgtggcgtagtattttatggttgtgaaaattatccacagtgcgattatgta
tcatgggatatgccacttacaagtaattgcaagacttgtggttcattcttatttagacat
cgtttcaaaaatggaagaactattttatattgcagtaatgatgattgtgctacaagaaaa
gaagatactcctataaataaggaaattaataaattaaaagaaaaaattcaacagcagact
gctaagaaattagcggaattggcacaaaaagaagcacaagcacaagaagaaaatgaaaat
aaagagcataaagaagaaaacaaagcatag
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