Megamonas funiformis: GXM21_05535
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Entry
GXM21_05535 CDS
T06475
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfun
Megamonas funiformis
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfun03016
]
GXM21_05535 (truB)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GXM21_05535 (truB)
Transfer RNA biogenesis [BR:
mfun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GXM21_05535 (truB)
Prokaryotic type
GXM21_05535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIB59868
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All DBs
Position
1119540..1120412
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AA seq
290 aa
AA seq
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MPNGFVNVLKAPGITSHDIVSHLRKVYGLKKIGHAGTLDPAAAGVLPVALGKATRMLEYM
DDVDKSYKVEVTFGLSTDTGDDTGKIIETMENYTMPTDEKVKEALETFRGEIKQKPPMYS
AIRINGEKAYNLARKNIEVEMPERDVVIHDIKFQEMTQNGFIFEVVCSKGTYIRSLCMDI
GKYLGIPTVMSFLIRTHVGAFKLEDAFTTEEIGLLPHIALLSIDFPIKHLPKYVISDEEA
VMIKQGKQIAVKEDEEITEKFIRLYKDKEFAGIGRYVFSEHKIAPHKVVL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatggatttgtaaatgttttgaaggcaccaggaataacttcacatgatattgta
tctcatttacgtaaagtttatggattgaaaaaaattggtcatgctgggactttagaccct
gctgctgctggagttttgccagtggcacttggaaaagctacaagaatgcttgagtatatg
gacgatgtagataagtcctataaagtagaagtaacttttggtctgagcactgatactggt
gatgatacaggaaaaatcattgaaacgatggaaaattatactatgcctacagatgaaaaa
gtaaaagaggcattagaaacatttcgtggtgaaataaaacaaaaaccaccaatgtattca
gctattagaattaatggtgaaaaagcgtataatttggctcgtaaaaatatagaagtagaa
atgccagaaagagatgttgtcattcatgatattaaatttcaagagatgacacaaaatggt
tttatttttgaagtagtttgttctaaaggtacttatattcgcagtttatgtatggatatt
ggtaaatatttaggaatacctacagtgatgagtttcttaattcgcactcatgtgggagca
tttaaattagaagatgcatttactacagaagaaataggcttattaccacatatagcgcta
ttatcaatagattttccgataaagcatttaccaaaatatgttatttctgatgaagaagca
gtaatgattaaacaaggtaaacaaattgctgttaaagaagatgaagaaataacagaaaaa
tttattcgtttatataaagataaagagtttgctggtataggtcgttatgtatttagcgaa
cataagatagcaccacataaggtagtattataa
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