Megamonas funiformis: GXM21_06585
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Entry
GXM21_06585 CDS
T06475
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mfun
Megamonas funiformis
Pathway
mfun03030
DNA replication
mfun03430
Mismatch repair
mfun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXM21_06585
03430 Mismatch repair
GXM21_06585
03440 Homologous recombination
GXM21_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfun03032
]
GXM21_06585
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_06585
Enzymes [BR:
mfun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXM21_06585
DNA replication proteins [BR:
mfun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXM21_06585
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXM21_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QIB60070
LinkDB
All DBs
Position
complement(1298972..1302406)
Genome browser
AA seq
1144 aa
AA seq
DB search
MKLEKSDVNTVVENHMDFTHLHVHTEYSLLDGASRVKKLIAHAKELGMKSIAITDHGTMY
GTIAFYEEALKQGIKPIIGCEVYVAPKSRFDNFEVEGTRYYHLILLAENNKGYQNLIKLV
SLANIEGMYYKPRVDKDLLRQYHEGIICLSSCIAGEIPQAIIRDNMERAEKLVQEYVDIF
GKDNFFLEIQNHQIPEEAKANKGLISLAQKYDLKLVATNDIHYIKKEDNDFHDVLLCIQT
GRTLDDKDRMKFYNDDFYLKSGAEMLALFKDTPEAITNTLEIANRCNVSFEFGHLHLPNF
PLPEGMTDEQYLHKLCKEKIHNRYAEVTEEIQQRLDYELSIIHRMGYDSYFLIVWDFINF
ARSQNIAVGPGRGSAAGSIVAYILGITDIDPLKYSLLFERFLNPERVTMPDIDIDFCYIR
RDEVIEYVKRRYGDDHVAQIITFGTMAAKGAVRDVGRVMNMPYNEVDKIAKLIPQELGMT
LDKALKDSSELLTLYQENLEVRKLIDFAKDVEGMPRHSSTHAAGVVISKDPVTDYVPIQI
SEGTFVTQYDKDCVEELGLLKMDFLGLRTLTVIADALTNIKNNRGIEINLDEIPLEDEKT
SQMLCRGETGAVFQLESAGMTTLVKDLQPTGFADLIPVMALYRPGPLGSGMVTDFINGRH
GRKKVTYIHPDLEPILKETFGVILYQEQVMQIVQVLAGFTLGQADILRRAMGKKKHDVLM
SQKENFLKGAKDNGVDDKLAETIFDLLLHFADYGFNKSHSAAYALVSWRTAYLKAHYPQE
FMAAILTSLMTSNKIGEYIEQCKHMGIDILPPDINASRDTFTVDKNSIRFGLAAVKNVGE
NALKTIVDIREKDGLFKSLEDFCSRVSSRCINKRALENLIKCGAFDSLGYNRAQYMAVLD
QAMDLGSRRQKDLASGQMDLFGDFMEEEKSIDKLEMPKMQEFPKIELLNMEKEITGFYIT
GHPLEEYREKIQYLTTIESLEKQKDGKYISVAGIIRKAKRVTTKKGDMMCFLEIEDFLGV
VEVIVFPKAFYDNINYLVPDIPVVVRGKLDKSDDNNKIIADKVIGLEDYTPEFCIIVKPE
QEDNAFFSKITETLQENAGPCPVYMYFMSSKKMIKGNREFWIDGSETVVNNLKNLLGKNS
IKQR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagaaaaatctgatgtaaatactgtagttgaaaatcatatggattttactcat
ttgcatgtgcatacagaatatagcttattagatggtgctagtagagtaaaaaaattaatt
gcacacgcaaaagaattgggcatgaaatctatagcgatcactgaccatggtactatgtat
ggaacgattgctttttatgaagaagctttgaaacaaggaataaagcctattattggttgt
gaagtttatgtagcaccaaaatctcgttttgataattttgaagtggaaggcactcgttat
tatcatctaattttgttagcagaaaataataagggatatcaaaatctcattaaattggtt
tctctagcaaatattgaaggtatgtattataaacctcgtgtggataaagatttattgcgt
cagtatcacgaaggtattatttgtttgagcagttgtatagcgggcgaaattcctcaagca
attattcgtgataatatggaacgtgcggaaaaattagtgcaggaatatgtagatattttt
ggcaaagataatttctttttagaaattcaaaatcatcaaattcctgaagaagctaaagcg
aacaaaggattaatcagtttagcacaaaaatatgatttaaaattagtggctacaaatgat
atacattatataaaaaaagaagacaatgattttcatgatgtgcttttgtgtatacaaaca
ggcagaactttagatgataaagatagaatgaaattttataatgatgatttctatttaaaa
tctggtgctgaaatgcttgctttgtttaaagatacaccagaagctattacaaatactttg
gaaattgcaaatcgttgtaatgtgagttttgaatttggtcatttacacttaccaaacttt
cctttgccagaaggtatgactgatgaacagtatttgcataaattgtgtaaggaaaaaatt
cataatagatatgctgaagttacagaagaaatacaacaaaggctagattatgaattatct
attattcaccgcatgggctatgatagttattttttgattgtatgggattttataaatttt
gctcgcagtcaaaatatagcggtagggcctggtcgtggttcggcagctggtagtattgta
gcgtatattttgggaattacagatattgacccactgaaatatagtttactctttgaacgt
tttttaaatcctgaacgtgtaacaatgccggatatagatattgacttttgttatattcgt
agagatgaagttattgaatatgtaaaaagaagatatggcgatgaccatgtagcacagata
attacttttggtacgatggcggcaaaaggtgcagtgcgagatgttggtcgtgtcatgaat
atgccttataacgaagtggataagatagcaaagttaattccgcaagaattaggcatgact
ttggataaagcattaaaagattcatcagagttgttgactttatatcaagaaaatcttgaa
gttcgtaaattaattgattttgccaaagatgtagaaggtatgccacgccattcttcaact
catgctgctggtgtagttatttctaaagatcctgttacagattatgtacctattcagata
tctgaaggtacatttgtaactcagtatgataaagattgtgttgaagaattaggtctattg
aaaatggactttttgggattgcgtacacttactgttattgctgatgctttgacaaatata
aaaaataatcgcggtatagagataaatttagatgaaattccacttgaagatgaaaagact
tcgcaaatgctttgtcgaggagaaacaggagcagtatttcagttagagtctgctggcatg
actactttggtaaaagatttgcaaccaactggatttgctgatttaattcctgttatggca
ttgtatcgaccagggcctttgggcagtggtatggtaacagatttcatcaatggtagacat
ggcagaaaaaaagtaacatatattcatccagatttagagccaattttaaaagaaactttt
ggcgtgattttgtatcaagaacaggttatgcagatagttcaagtattagctggtttcact
ttagggcaagctgatattttgcgtcgtgcaatgggtaagaaaaagcatgatgtcttgatg
tcgcaaaaagaaaatttcttaaaaggtgccaaagataatggtgtagatgataaactcgca
gaaactatttttgatttattattacattttgccgattatggttttaataaatctcatagt
gctgcttatgcacttgtgtcatggcgaacagcatatttaaaagctcattatccgcaggaa
tttatggcggctattttgactagcttgatgacaagtaataaaattggcgaatatattgaa
caatgtaaacatatgggaattgatattttgccaccagatataaatgctagtcgtgataca
tttactgtagataaaaatagtattcgttttggtttagctgcagtaaaaaatgtaggtgaa
aatgctttaaaaacgattgtagatattcgtgaaaaagatggtctatttaaatctttagaa
gatttttgttcacgagttagcagtagatgtatcaataaaagagctttagaaaatctcata
aaatgtggtgcatttgattctttgggttataatcgcgctcaatatatggctgttttagat
caagctatggatttaggctctagacgtcagaaagatttagctagtggacagatggattta
tttggtgattttatggaggaagaaaagagcattgataaattggaaatgccaaaaatgcag
gaatttcctaaaatagaattattaaatatggaaaaagaaatcacaggcttttatatcaca
gggcatccactagaagaatatagagaaaaaatacagtatttgactacgattgaaagtcta
gaaaagcaaaaagatggaaaatatatctctgtagcaggaattattcgcaaagcaaaaaga
gtaactacaaaaaaaggcgatatgatgtgctttttagaaatcgaggactttttaggtgta
gtagaagtcattgtatttccaaaggcattttatgataatattaattatttagtgccagat
attcctgttgtagttagaggaaaattagataaaagtgatgataataataaaatcatcgct
gataaagtaattggtttagaagattatacaccagaattttgtattattgtaaaaccagag
caagaagataatgctttctttagcaaaataacagaaacattgcaagaaaatgctggccct
tgccctgtttatatgtattttatgagcagtaaaaaaatgattaaaggcaatcgagaattt
tggattgatggcagtgaaactgtagtcaataatctaaaaaatcttttaggcaaaaactca
attaaacaaagataa
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