KEGG   Megamonas funiformis: GXM21_08840
Entry
GXM21_08840       CDS       T06475                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
mfun  Megamonas funiformis
Pathway
mfun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mfun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GXM21_08840 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfun03400]
    GXM21_08840 (uvrA)
DNA repair and recombination proteins [BR:mfun03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GXM21_08840 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GXM21_08840 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 nSTAND3 AAA_23 AAA_22 ATPase AAA_25 AAA_21 ATPase_2 Viral_helicase1 DnaJ_CXXCXGXG NACHT cobW MafB19-deam NTPase_1 ExoX-like_C
Other DBs
NCBI-ProteinID: QIB60487
LinkDB
Position
complement(1745610..1748456)
AA seq 948 aa
MSDFITVKGARAHNLKNIDVKIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGQMDKPDVDYIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARVGKPH
CPKCGKPITQQTVDQMVDNIMSLPERSKLLIMAQIIRGKKGEHKKVLEQIRKEGYVRVRI
DGEVIDINEEINLEKNKKHTIEVVIDRLIVREGIEQRLADSLETALDIGEGIVYVQVVDG
ELLMFSQNFACIDCGISLPEIAPRMFSFNSPYGACPECSGLGSHQQFDIDLVMPNKNLSP
AEGLFAPLSKNPASYAMVQIEAVLKKYGYTLNTPWNEIDKNIQEYLINGSGEERFNYSYV
NMYDEYKEYFSPFEGVMPMLERRYKETNSDIMRESYEAYMSTTPCPKCKGARLKPEVLSI
TIGDKNIKQVTDMTIAEASEFFKNLKFTEREEIIAKQIMKELHARLGFLLDVGLEYLTLS
RAAGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNNRLLATLKHLRDLGNTL
IVVEHDEDTMYAADCIIDIGPKAGAGGGEVVAQGTVEEIKQNLNSITGQYLSRRKYIPVP
KDRRKGNGNFIEVVGAKENNLKNINVKFPLGVFTVVTGVSGSGKSTLVNEILYKGLASKL
YTIKGKPGKHKEIKGIENIDKIINIDQSPIGRTPRSNPATYTGVFDSIRELFSQTNEAKI
RGYKPGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCKGARYNRETLEVKYKGK
TISDVLNMTVDEGCVFFENIPKIYRYMKVLQDVGLGYIQLGQPATTLSGGEAQRVKLASE
LARRSTGKTLYILDEPTTGLHTADIHQLLDVLQRLVDGGDTVVVIEHNLDVIKTADYLID
LGPEGGNRGGTIVAKGTPEDITKVKASYTGHFLKPLLEEGKRLNKRDA
NT seq 2847 nt   +upstreamnt  +downstreamnt
ttgtctgattttataacagtaaaaggagcgagagctcataatttaaaaaatatagatgta
aaaattcctcgtgataaattagtagtagtaacaggattgagtggcagtggaaaatcttca
ttagcttttgatacgatatatgccgaaggtcaacgtcgttatgtagagtctttatctgca
tatgctagacaatttttggggcagatggataaaccagatgttgattatatagaaggacta
tctcctgctatatctattgatcaaaagacaacaagtcataatcctcgttctacagtggga
acagttaccgagatttatgattatttgcgtttattattcgctagagtgggaaaacctcat
tgtccaaaatgtggtaaaccgatcactcagcagacagtagaccaaatggtggataatatc
atgagtttgccagaacgcagtaaattattgatcatggcacaaatcattcgtggaaaaaaa
ggcgaacataaaaaagtattggaacaaattcgcaaagaaggttatgtgcgtgtacgtatt
gatggcgaagttatagatattaatgaagaaattaatctagaaaaaaataaaaaacatacg
attgaagtggtaatcgaccgcctcattgtgcgtgaaggcattgaacaacgtttagcagat
tcacttgaaactgctttagatataggtgaaggaattgtctatgtacaagtggttgatggt
gaattattgatgtttagtcaaaattttgcttgtatagattgtggtatcagtctgccagag
attgctccgcgtatgttttcatttaatagtccatatggggcttgccctgaatgtagtgga
cttggcagtcatcaacaatttgatattgatttagtaatgcctaataaaaatttaagccca
gcagaaggtttatttgcaccattatctaaaaatccagcttcttatgctatggtacagatt
gaagctgtattaaaaaaatatggttatactttaaatactccatggaatgaaatcgataaa
aatattcaagagtatttgataaatggttcaggtgaggaaagatttaattattcatatgtg
aatatgtatgatgaatataaagagtatttttcaccatttgaaggtgtaatgcctatgctt
gagcgtcgttataaagagactaattcagatataatgcgagaatcatatgaagcatatatg
agcactacaccatgtccaaaatgtaaaggggcaaggttaaaaccagaagtattgtctatc
actattggcgataaaaatataaaacaagtaacagatatgactatcgctgaagctagtgaa
ttttttaaaaatcttaaattcactgagcgtgaagaaatcattgctaaacagattatgaaa
gaacttcatgctagattgggctttttactagatgtagggttagaatatttgacattatct
agagcagcaggcactttatctggtggggaagctcagcgtattcgcttagctacacagatt
ggttcaggtttagtcggtgtattatatattttagatgaacctagtataggacttcatcaa
agagataataatagattgttagctacattaaaacatcttcgcgatttaggaaatacattg
attgtggtagaacatgatgaagatactatgtatgcagcagattgtattattgacataggg
ccaaaagcaggagctggtggcggtgaagtagtagctcaaggaactgttgaagaaatcaag
caaaatttaaattcaataacagggcaatatttaagtcgtagaaaatatataccagtacca
aaagatagaagaaaaggcaatggcaattttatcgaagttgtcggtgctaaagaaaataat
ttaaaaaatataaatgtaaaatttccattaggtgtatttactgtagtaacaggagtttct
ggttctggaaaatctactttggtaaatgaaatattatataaaggtttagcaagtaaatta
tatacaataaaaggaaaaccaggtaaacataaagagataaaaggcattgaaaatatagac
aaaatcatcaatattgaccaatcgccaataggtagaacacctcgctctaatcctgcgaca
tatacaggtgtatttgatagtattcgtgaattattcagtcaaactaatgaagcgaagata
agaggatataaacctggtcgttttagttttaacgttaaaggtggacgttgtgaagcttgt
catggtgatggcattataaaaatcgaaatgcactttttaccagatgtatatgttccatgt
gaagtttgtaagggagcgagatataatcgtgaaactttagaagtaaaatataaaggaaaa
actatatctgatgtactcaatatgacagttgatgaaggctgtgtattttttgaaaatata
cctaaaatttatcgctatatgaaagtattacaagatgtaggacttggttatattcaattg
ggacagccagcgacaacattatctggcggtgaagcacagcgtgtaaaattagcttctgaa
ttagctagaagaagtacaggcaaaactctttatattttagatgaaccgacaacaggactg
catacagcagatattcatcaacttttagatgtattacagcgattagttgatggtggagat
actgtagttgtcattgaacataatcttgatgtgattaagacagcagattatttgattgat
ttaggtcctgaaggtggcaatcgcggtggtactattgtagccaaaggaacaccagaagat
ataacgaaagtaaaagcttcatacacagggcattttttaaaacctttacttgaagaagga
aaaagattaaataaacgagatgcataa

DBGET integrated database retrieval system