Megamonas funiformis: GXM21_11650
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Entry
GXM21_11650 CDS
T06475
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mfun
Megamonas funiformis
Pathway
mfun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXM21_11650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfun03019
]
GXM21_11650 (recQ)
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_11650 (recQ)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM21_11650 (recQ)
Messenger RNA biogenesis [BR:
mfun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXM21_11650 (recQ)
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXM21_11650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIB61005
LinkDB
All DBs
Position
2331746..2333512
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AA seq
588 aa
AA seq
DB search
MLNKARQILQKFYGYEDFRPGQKKVVESLLNKNDTVAIMPTGAGKSICFQIPALLFEGVT
LVISPLISLMKDQVDSLRQLGIAAVYINSSVSKAQLYKDLQDISAGFYKIIYIAPERLTS
EYLPDSFKNLNISMVAVDEAHCLSQWGHDFRPSYRNILNFTNSLRIKPIISAFTATATPE
VKTDIINLLGLKQPNVFVTGFDRPNLYFSVLRGEVKDKFVIDYVKKHQDEAGIIYVGTRK
DVDALQVLLEIKGIKAGRYHAGMTDEERNQMQEDFLYDNLSVMVATNAFGMGIDKPNVRY
VIHYNMPKNMEAYYQEAGRAGRDGLSGNCILLYSPQDTQLQKFLISKSTESEIRQQLEYK
RLQSMVDYCHTPQCLRAFILHYFGEFDVEEHCDNCSNCKLEGELIDITIDAQKVLSCVYR
MHERFGVKMIAEVLKGSKSAKIKQFNFERLSTYGLMKERKLKDISDLILRLSAMQYLDIT
ESQYPVVTLNELSWQVLRGQKKVWQKMVIVKKAKAKGELFEALRSLRKELATKEKLPPYM
IFSDATLTQMATDKPTDLELMKNIRGVGEFKLQKYGEEFLTVIKSYIS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaagcaagacaaatactacaaaaattttatggatatgaagactttcgacca
gggcagaaaaaagtagttgaaagtttattaaataaaaatgatacagtggcgattatgcct
acaggtgcgggaaaatctatttgttttcaaatccctgcattattatttgaaggggtaaca
cttgttatatcgccacttatttctttgatgaaagaccaagttgatagtttacgtcagcta
gggatagcggcagtatatattaatagttctgtcagtaaggctcaattatataaggattta
caagatatatctgctggtttttataaaattatttatatagcaccagagcgattgacatct
gaatatttaccagatagttttaaaaatttaaatattagtatggtagcagttgatgaagcg
cattgtttatcgcaatggggacatgattttcgtcctagttatcgcaatatcttaaatttt
actaattcattgcgcattaagccgattatcagtgcttttacagcaacagctacaccagag
gtaaaaacagatattataaatttattgggacttaaacaacctaatgtatttgtaactggt
tttgatagaccaaatttatatttttccgtattaagaggagaagtaaaagataaatttgtc
atagattatgtaaaaaaacatcaagatgaagctggaattatctatgtgggcactagaaaa
gatgtagatgctttgcaagttttattggaaataaagggcattaaagcaggtagataccat
gccggtatgacagatgaggaaagaaatcaaatgcaagaagattttctctatgataatctt
tctgttatggtggcgacaaatgcttttggtatgggcatagataagccaaatgttcgctat
gttattcattataatatgcccaaaaatatggaagcgtattatcaagaagcaggtagagca
ggtcgtgatggactttcaggaaattgtattttattgtatagtccgcaagatacacagctt
caaaagtttttgataagtaaatctacagaaagtgaaattcgtcaacaattagaatataaa
agattgcagtcaatggtggattattgtcatacaccgcaatgtctaagagcatttatcttg
cattattttggtgaatttgatgtagaagaacattgtgataattgtagtaattgcaaatta
gaaggcgaattaatagatattacaattgatgcacaaaaggttttatcgtgtgtctatcgt
atgcatgaacgcttcggcgtgaaaatgatagctgaagtcttaaaaggttcaaaaagtgcg
aagataaaacaatttaattttgagcgtttatctacgtatggcttgatgaaagagcgaaag
ctaaaagatatcagtgatttaattttaagacttagtgctatgcaatacttagatatcaca
gaaagccaatatccagtggttactttaaatgaattgtcatggcaagtgcttcgcggtcaa
aaaaaggtttggcaaaagatggtaattgttaaaaaagccaaggctaaaggtgaattattt
gaagctttgcgcagtttgcgtaaagaattagcgacaaaagaaaaattaccaccatatatg
attttttctgatgctacacttacacagatggcaacagataaaccgactgatttagaattg
atgaaaaatattcgcggtgtaggtgaatttaaattacaaaaatatggtgaggaattttta
acagtgataaagagctacatatcgtaa
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