Megamonas funiformis: GXM21_12230
Help
Entry
GXM21_12230 CDS
T06475
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mfun
Megamonas funiformis
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_12230 (addB)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM21_12230 (addB)
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GXM21_12230 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
CoV_NSP7
Motif
Other DBs
NCBI-ProteinID:
QIB61117
LinkDB
All DBs
Position
2459558..2463130
Genome browser
AA seq
1190 aa
AA seq
DB search
MLEFIIGRAGSGKTTACLNAIKEKLIHSPTGKPLVILLPDHMTFAIERQLALELKDYGGF
TRAYVLGMSRLAYQVLMRCGGILHPHLNEIGKELLLSRVLSSTKLSILAKAARQHHFTAS
VSQIIEEFKTSGISVTTLQDILALIDNDSLKQKLSDLTSIYAGLDEQMAGRYHDSEDMME
LAIKKLPECTWLQDAEIWIDGFDAFNPQHFRVVEQLLALASDIHLTLCINNLNDIEHEAP
TALFHRQFNVFQQINNMTKKLAIPTKITTLTANHRHKQQDLAFIEEQLFKFPLTKRNYTG
GLQIVEAPNRRLECEAVACDILRLCHEENYRHYDIGILIRSSEDYSELLQAVLNDFNIPY
FSDSKRQTAHHPLAELIRSSLESISTWQYEPLFRAFKTDFFNDKYLQTLKNLEENTDEIN
LNLTEQKAIARKAIDKLENYVLAFGIRGRNRWCEESDWRFSHHKQIDSMGTDLEEEANFT
AINLTRRSLVAPLEKFYTACQNSQTIEEYTLALYDFLLDLQIPTQLQLWEKIAQEQNDIA
LAKEHHQIWDNIIELMDQLVQTCGKDYINLENYLKLINDGLDSIQIALIPPGYDYVTLAP
FEHNTLNNKKAIYILGANEKIMPRHSKTEGILSDAERLLMASLGLNISSGTMEDNFAERY
LLYKGFSLATDYLWVSYALADGEGAGLNKSILITRLQKILPKAKFTAIPLDKIISYPSDF
TLEENPLDSSFAIKTMQVSSTRKTLSHLTSALRQARDGEDLASFWQDVYNYLLTADVPLS
TALQSIFAQAPKPVLPSDLASKLYTKRKTLRGSVTRFEQFFNCPFKHFAHYALNLQERKE
FKFAAPDLGILLHAIMHQFGEILVKRQISWQDVTHEQCQQICKQIIKTIAPKLQNEILLS
SNRYRHLLQRIEQLSIDSLMRLVEFAKHSEFSPKALEQDFGANSSMPPLLFTDEDNHKIE
IIGQIDRIDFNDNYYLVIDYKSGNAFINLLQVYYGLKLQLLTYLLVAQNTTLQLYNMENA
IPAGILYCFLKTPVITGTNKLSVQQIKTEIEKKMRMPGWVLADPEIIKKIDDSSNFIKVR
LNKNQDDVSAQSRSYVKTAEEFDLLMKHIENTLKEAGSEILKGNADIAPYKLKDETACKY
CPYIAICRFDKYISGYNYREINQLNDEEIIEKLKQKEGFSCLGQHSNNNL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgttagaattcatcattggcagagcaggaagtggtaaaaccacagcttgtttaaatgcc
attaaagaaaaattaatccattcaccaacagggaaacctctagttatattattgcctgac
catatgacttttgcgattgaacgtcaattagctttggaattaaaagattatggcggtttt
actagagcttatgtcttaggcatgagcagacttgcctatcaagtattaatgcgttgcggt
gggatactccatccacatctcaatgaaatcggtaaggaattattattatctagagtttta
agttctacaaaactctctatcttagccaaggctgctcgccaacatcatttcacagcttct
gtatcacaaatcattgaagaattcaaaacttctggtatcagcgttactactttgcaagat
attttagcgcttattgataatgattcactcaaacaaaaattgagcgatttgacttctatt
tacgctggtcttgatgaacagatggctggtcgttatcacgatagcgaagatatgatggaa
cttgcgatcaaaaaattacctgaatgtacatggcttcaagatgctgaaatctggatagat
ggttttgatgctttcaatcctcaacattttcgcgtagtcgaacaattattagcattagcc
agtgatattcatttaacgttatgcatcaataatttaaatgatattgaacatgaagcacct
actgctttatttcatcgccaattcaatgtatttcaacagataaataatatgactaaaaaa
ttagctatacctacaaagataactacacttacagcaaatcaccgccataaacaacaagat
ttagcctttatcgaagagcaattatttaaatttcctttgacgaaaagaaattatactggc
ggtcttcaaatagtcgaagcacctaaccgccgtttggaatgtgaagctgtcgcctgtgat
attttgcgtctatgtcacgaagaaaattatcgccattatgatatcggtattttaatccgc
agtagtgaagattatagcgaattattgcaagctgtcttgaatgattttaatattccttat
ttcagcgatagtaagcgacaaactgctcatcatcctctagctgaattaatccgctctagt
ctagaatctatttctacatggcaatatgaaccattatttcgagcttttaagactgatttc
ttcaatgataaatatttgcaaacgcttaaaaatctcgaagaaaatacagatgaaataaat
ttaaatttgacagaacaaaaagctatcgctcgtaaagctattgataaattagaaaattac
gtcttggcttttggtattcgcggtcgcaatcgctggtgtgaagaaagcgattggcgtttt
tctcatcataaacagattgactctatgggtacagatctggaagaagaagctaatttcact
gctataaatctaactagacgcagtttagtcgctcctttagaaaaattctacactgcttgc
caaaattcgcagactatcgaagaatatacgcttgccctatatgattttctgcttgattta
caaataccgactcaattgcaattatgggaaaaaatagcccaagaacaaaatgatattgcc
cttgccaaagaacatcatcaaatctgggataatatcattgaattgatggatcaattagtg
cagacatgtggcaaagattatatcaatcttgaaaattatttaaaattaatcaatgatggc
ttagatagtatccagattgctttaataccacctggctatgattatgttacacttgcacca
tttgagcataatactttaaacaacaagaaagctatttatattttaggtgctaatgaaaaa
atcatgcctcgccatagtaaaacagaaggtatcttaagtgatgctgaacgtttattgatg
gcaagtctagggctgaatatctctagcggtacaatggaagataattttgccgaaagatat
cttctctacaaaggcttttccttagctacagattatctttgggtatcctatgctctagct
gacggtgaaggagctggactgaataaatccatcttgataactagattgcaaaagattttg
cctaaagcaaagttcacagccattcctctagataaaataatctcttatccaagtgatttt
acgctagaagaaaatcctttagatagctcatttgcgataaagaccatgcaagtatcttca
acaagaaagacacttagccatttgacttccgctcttcgccaagctcgtgatggtgaagat
ttagcgtcattttggcaagatgtctataattatctcttaactgctgatgtgcctttatct
acagcactacaaagtattttcgcccaagcaccaaaacctgtattgccatctgatttagct
agtaaattatatacgaaacgcaaaacacttcgtggcagtgtaacacgctttgaacaattc
tttaattgcccattcaaacattttgctcattatgctctaaatctacaagaacgcaaagaa
tttaaatttgccgctccagatttaggaattttactccatgccatcatgcaccaattcgga
gaaatcctcgtgaagcgacaaatatcatggcaagatgtaactcatgaacaatgtcaacaa
atctgcaaacaaatcatcaagacaattgctcctaaattgcaaaatgaaattctcttaagc
tccaatcgctatagacatcttttgcaaagaattgagcaattatccattgattctttgatg
cgtctagtggaatttgccaaacacagtgaattttcacctaaagctttagagcaagatttc
ggtgctaatagctccatgcctcctttattattcacagatgaagataatcacaaaatagaa
atcattggacagattgaccgcattgattttaatgataattactatctagtcattgactat
aaatcaggcaatgcttttattaatctactacaagtatattatggcttgaaattacagctt
ttgacttatcttttagtagctcaaaatactactttgcaattatataatatggaaaatgcc
attcctgctggtattttatattgctttttaaaaacacctgtcatcacaggtactaataaa
ttatccgttcaacaaattaaaacagaaattgaaaagaaaatgcgtatgccaggctgggta
ctagcagatccagaaatcatcaaaaaaattgatgactcttctaattttatcaaagtgcgt
ttaaataaaaatcaagatgatgtctccgctcaaagtcgttcctatgtaaaaacagcagaa
gaattcgatttattgatgaaacatatcgaaaatactttaaaagaagctggcagtgaaatt
ttaaagggcaatgctgatatcgcaccgtataaattaaaagatgaaacggcttgcaaatac
tgtccatatatcgccatctgtcgttttgataaatatatctccggctataattatcgagag
ataaatcaactcaatgacgaagaaatcattgaaaaattaaaacagaaagaaggattttca
tgccttggtcagcacagcaacaacaatctataa
DBGET
integrated database retrieval system
