Megamonas funiformis: GXM21_12235
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Entry
GXM21_12235 CDS
T06475
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mfun
Megamonas funiformis
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfun03400
]
GXM21_12235 (addA)
Enzymes [BR:
mfun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM21_12235 (addA)
DNA repair and recombination proteins [BR:
mfun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GXM21_12235 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DEAD
AAA_22
AAA_11
AAA_30
nSTAND1
ResIII
IL11
AAA_16
Trans_reg_C
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
QIB61118
LinkDB
All DBs
Position
2463097..2466777
Genome browser
AA seq
1226 aa
AA seq
DB search
MPWSAQQQQSINTYDKNILVAAAAGSGKTSVLVERVIQRIVNKTCDINQILVVTFTNAAA
AEMRERIASAITEKLSDKDKERQLVLLNASSISTLHAFCQNIIRQYFHQLGLDPKFRLAN
PQEIELLKLDVLEELFETNYDKDDNEDFLEFTDTYGNERGDDSTYDIILKLYEYSRSQPF
PLQWLKALPSYFQINNADELNDCPWLQIIKDNVKDGLNIAIDNSQKMYQLATDLNLPPYA
DIASEDLAFLYDLNNLIDTSWQEFFNLINEFKFKALRISKKFSVNEEDKATISALRDETK
KIIKQLKEHYFTQTIEDTLSDMPQLYKQANSLCNITIEFSQAFSKAKNERSLVDFSDLEH
FTLKLLTEENSTAEKLIPSSIAQTLQEKYVEIMVDEYQDTNGVQEAILNLIASRTKPNLF
FVGDVKQSIYKFRLAEPELFLAKYHQYPHEEDCLRIDLAQNFRSRKEILDGVNFIFSQIM
TTKAGELSYGKDEALYCGFDYPQSEFLTLKSPIELTLLDKQQKLTLTDNDDSDNEDTVQG
FQAEAKYIALRIKELMNKQPLVFDKHTKTYRPIKWKDIVILLRSVQDKAKILADVLREDN
IPVYATIETGYFQETEVRIMLSLLQIIDNPQQDIPLTAILYSPIFNFTVEDLAHIRLINP
QLNMYETLLFMTSINELQEQLLPVDKKVFAKLQIKVNDFLTKLHYWRDYARSHSVPELIW
LLLNDTGYYDYVGGLPEGSVRQANLRALYDRAFNYEQTSFRGLFRFLRFIHKMQHMGNDL
AVARNLSDSEDVVRIMSIHKSKGLEFPLVILADIGKQFNLKDVQESVLFHKKLGLGLYVN
DVKHHYRYQNLSRQAIIQQIVKEYKAEEMRILYVAMTRAREKLILTGTVRNMEKFAQYAC
SQLQTTTKTLPDYFIMQAKSYLDWLAPTIARHKDGLVLRQSATNESAVLLDDPSQWQISL
INSLDVTDKTIISTVNEDIINKVKKLQPLPATKQKDNIDKLLNWSYPHQEALSIPAKLSV
TEIKQQFASTDYAPQDDNAQTLFEETSFKRPQFLQKQTKMTATEYGSLMHTVMQHLDFHG
DLSDKGILAQLQNLADREIIDKQHINKIYRKNIREFLFSPLGMRIQKAKSLQRELAFNRM
INAQIYYPQAEDNDTIFIQGIIDLLVEEDDGLILLDYKTDNCTQTEAKAKYAMQIELYAQ
AASEIMRKPIKEKYLYLFHDASLIKM
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgccttggtcagcacagcaacaacaatctataaatacttatgataaaaatatcctcgta
gccgcagctgctggctcagggaaaacttctgtattagtagagcgtgtaattcaacgcatt
gtgaataaaacatgcgacatcaatcaaatacttgtcgttactttcactaatgcagccgca
gctgaaatgcgtgaacgtatagccagtgccatcacagagaaattatccgataaagataaa
gagcgtcaactcgtattattaaacgcttcttcaatctccacacttcatgctttttgtcaa
aatatcattcgccaatatttccatcaattaggtttagatcctaaatttcgtcttgctaat
cctcaagaaattgaattattaaaactcgatgtgcttgaagaactctttgaaacgaattat
gacaaagatgataatgaagactttctagaatttactgacacctatggcaatgaacgtggc
gatgatagcacctatgatattatcttaaaactatatgaatactctcgcagtcagcctttt
cctttacaatggctgaaagctctaccttcatattttcaaatcaataatgctgatgaactc
aatgattgcccatggctacagataatcaaagacaatgtcaaagatggtttaaatatagcc
atagacaatagccaaaagatgtatcaattagctacagacttaaacttaccaccttatgca
gatatcgccagtgaagatttagcttttctttatgatttaaataacttaatcgacacttca
tggcaggaattttttaatttaatcaatgaatttaaatttaaagctctgcgaatttctaaa
aaattctctgtaaatgaagaagataaagctaccatctccgctcttcgtgatgaaactaag
aaaatcatcaagcaattaaaagagcattattttacgcaaactattgaagatacactctct
gatatgcctcaattgtataaacaagccaatagtttatgtaatataaccatagaattttct
caagcttttagtaaagctaaaaatgaacgctctttagtcgatttttccgaccttgaacat
ttcactttgaaattgctcactgaagaaaattctactgctgaaaaactgataccttcatca
atcgcccagacactacaagaaaaatatgtagaaatcatggtcgatgaataccaagataca
aacggagttcaagaagctattttaaatctaatcgcttcacgcactaaaccaaatttattt
tttgtcggcgatgtaaaacaaagcatttataaattccgtttagctgagccagaattattc
ttagctaaatatcatcaatatcctcatgaagaagattgtcttcgcattgatttagcccaa
aacttccgcagtcgcaaggaaatccttgatggtgtcaatttcatcttttcccaaatcatg
actacaaaagctggagaattatcttatggtaaagatgaagccttatactgcggttttgat
tatcctcaaagtgaatttttgactttaaaatcaccgattgaattaactttattggacaaa
cagcaaaaattaactttaactgataatgacgatagtgataatgaagacactgtacaaggc
tttcaagctgaagctaaatatattgctcttcgcataaaagaattgatgaataaacagccc
cttgtctttgataaacatacaaagacttatcgccctataaaatggaaagatatcgttatc
ctactgcgttctgttcaagataaagctaagatattagctgatgtacttcgcgaagataat
attcctgtatatgccactattgaaacgggatatttccaagaaacagaagttcgcatcatg
ctttcattattgcaaataatcgacaatccgcaacaagatataccactgactgcgatttta
tactcacctatatttaatttcaccgttgaagatttagctcatatccgcctcatcaatcca
caattaaatatgtatgaaactttattattcatgacatctattaatgagctacaagaacaa
ttactccctgtagataaaaaagtatttgctaaattgcagattaaagtaaatgattttcta
actaaattgcattattggcgagattatgctcgcagtcatagcgtacctgaattaatttgg
ttattgctcaatgatacaggatattatgattatgtaggtggcttacctgaaggctctgta
cgccaagcaaatttaagagcgctctatgatcgagctttcaattatgagcaaacttctttc
cgcggtcttttccgcttcttgcgttttatccataaaatgcaacatatgggaaatgattta
gccgtagctagaaatctaagtgatagtgaagatgtagtacgtatcatgagtattcataag
agcaaaggtcttgaatttcctttagtaattcttgctgatatcggcaaacaattcaatctc
aaagatgttcaagaaagtgttctctttcataaaaaactcggcttaggtctttatgtaaat
gatgtcaaacatcactatcgctatcaaaatttatctcgccaggctatcattcaacaaatc
gtcaaagagtataaagcagaagaaatgcgtatattatatgtagctatgactagagctcgt
gaaaaactcatactcactggtactgttcgcaatatggaaaaatttgctcaatatgcttgt
tctcaattgcaaacaacgacaaaaactctacctgattatttcatcatgcaggcaaaatca
tatttagattggctagctcctactattgctcgccataaagacggcttagtcttacgtcaa
tcagctacaaatgaaagtgctgttttattagatgatccttcacaatggcaaatttcccta
atcaactcattagatgtcacagataaaactataatttccactgtaaacgaagatatcatc
aataaagtaaaaaaattacagccattgccagctacaaagcaaaaagacaatattgataaa
ttattgaattggtcttatcctcatcaagaggcattatccattccagcaaagttatccgtt
actgaaatcaaacagcaatttgcttcaaccgattatgctcctcaagatgataatgctcaa
acgctatttgaggaaactagttttaaacgaccacaatttttacaaaaacaaacaaaaatg
actgctacagaatacggtagtttgatgcatacagtgatgcaacatttagatttccacgga
gatttatccgataaaggcatattagcccaactccaaaatttagctgatagagaaataatc
gataaacagcatataaataaaatctaccgcaaaaatatccgtgaatttttattttcaccg
ctaggcatgcgtattcaaaaagcaaaatcactgcaaagagaattagcttttaaccgcatg
attaatgctcaaatttattatcctcaagccgaagataatgatactatctttatccaaggt
attatcgacttattagtagaagaagatgatggcttgattttattggactataaaacagat
aattgcacacaaacagaagctaaggcaaaatatgccatgcaaatagaactttatgctcaa
gcagccagtgaaatcatgcgaaaaccgattaaagaaaaatatctctatctttttcatgat
gctagcttgataaaaatgtag
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