Methanothermus fervidus: Mfer_0178
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Entry
Mfer_0178 CDS
T01351
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mfv
Methanothermus fervidus
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfv03032
]
Mfer_0178
03400 DNA repair and recombination proteins [BR:
mfv03400
]
Mfer_0178
Enzymes [BR:
mfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mfer_0178
DNA replication proteins [BR:
mfv03032
]
Prokaryotic type
DNA Topoisomerases
Mfer_0178
DNA repair and recombination proteins [BR:
mfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mfer_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
ADP76981
UniProt:
E3GXE9
LinkDB
All DBs
Position
complement(174933..177050)
Genome browser
AA seq
705 aa
AA seq
DB search
MTLVNEVIICEKPQAAEKIANSLSSSTKKKKYKNVPYWEIKKTDKKILVVPAVGHLYTLA
PSNKKKDYFFDLEWTPVYLVDKKRKYIKNYIDAIKKLGKKADRYIHACDYDIEGTLIGYN
VLRYCIGKKSLKKSLRMKFSTLTKRDIRKAYENLTSIDYGQVNGGITRHFLDFLFGVNIS
RALMNSIQNSTKKFVKLSAGRVQTPTLSILVDREREIKKFKPKTYWVIEAKTKFFTAKFK
EQKIFDKNKALKIVKECKNKNAIVKSVKITKRYRNPPVPFDLTTLQSEAYRLFGFSPRKT
QSLAQNLYLGGYISYPRTSSQKLPPSIDYEKIFEGLSKNPKFERYISKLSKPFKPYEGKK
TDEAHPAIHPTGVMPKNLNEDESKLYELIVHRFIAVFADKAKIANLRGVLSINDYEFIFN
KQKIIKEGWMSFYPYTSVKNEEFPEIKEGDKLKIEKIIKEEKKTKPPARYTAASLIKEME
VRGLGTKSTRAEIISALYDRKYIEGRKIKVKPLGIKIINILKKYCKKITSEKLTREFEKK
IKRIIKGEINKENVITEAKNEVKDILNSIEDKQKEIGEELYNAYKKSKIIGKCKCGGNLI
IRYSQKYKKRFVGCSNYPACKVTYSLPKNAIILESKCKRCGLPLISYGNPRRVACLNPKC
GKKIDEEKIVGKCPKCGNDLIIKSGRYGKFVGCKGFPKCKYVRSI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgtaaatgaagttataatttgtgaaaaaccacaagcagcagagaagattgct
aattccttatcttcatcaacaaaaaagaaaaaatacaaaaatgtaccatattgggaaatt
aaaaaaactgacaaaaaaatattggtagtacctgctgtaggacacttatatactttagca
ccttcaaataaaaagaaagattatttttttgatttagagtggacacctgtttatttagtt
gataaaaaacgaaaatacattaaaaattatattgatgcaataaaaaaattgggtaaaaaa
gcagatagatatatacatgcctgtgattatgatatagaaggaactttaataggttacaat
gtattaaggtattgtataggcaaaaaatctttaaaaaaatcactacgaatgaaattttca
accttaacaaagagagatataagaaaagcatatgaaaatctcacatctatagattatggc
caggttaatggaggaatcacaagacattttcttgattttttatttggtgttaacatctct
agggcattgatgaactctattcagaattccacaaaaaaattcgtcaaactatcagctggc
agggttcaaacccctactctctctatattggtggatagagaaagagaaatcaaaaaattt
aaaccaaaaacatattgggtcatcgaagctaaaactaaattctttacggcaaaatttaaa
gaacaaaaaatatttgataaaaataaagcattaaaaattgttaaagaatgtaaaaataaa
aatgctatagtaaaatctgtgaaaattactaaaagatacagaaatcccccagttcctttt
gacttaacaaccttgcaatcagaagcatatagattgtttggatttagccctagaaaaaca
caatctctggctcaaaatttatatcttggtggttacatttcatatcctagaacttcttct
cagaaattaccaccaagtattgattatgagaaaatatttgagggattatctaaaaatccc
aagttcgaaagatatataagtaaattatcaaagccatttaaaccgtatgaaggtaaaaaa
actgatgaagctcatccggcaatccatccgacaggtgtaatgccaaaaaatttgaatgaa
gatgaatcaaaattatatgagttgatagttcatagatttattgcagtttttgctgataaa
gccaaaattgcaaatttaagaggagtattatccataaatgattatgaatttatttttaat
aaacaaaaaataattaaagaaggttggatgagtttttatccttatacaagtgtcaaaaat
gaagaatttccagaaattaaggaaggggataaattaaaaattgaaaaaatcattaaagag
gagaaaaaaaccaaaccacctgctaggtatactgcagcatctttaattaaagaaatggaa
gttagaggtttaggtacgaaatcaactagggcagaaataatatctgcattgtatgacagg
aaatatatagaaggtaggaagattaaagttaaaccacttggaataaaaataattaatatc
ttaaaaaaatattgtaagaaaattactagtgaaaaactcacaagagaatttgaaaaaaag
ataaaaagaataataaaaggagaaattaataaagaaaacgtgattactgaagctaaaaat
gaagttaaagatatattaaatagtattgaagataagcaaaaagaaataggggaagaatta
tataatgcatataaaaaatcaaaaattataggtaaatgcaaatgtggtggaaatttaata
atcaggtattcccaaaaatacaaaaaaagatttgtaggatgttcaaattaccccgcatgt
aaagttacttattcacttccaaaaaatgcaataattttggaaagtaaatgtaagagatgt
ggtttacccttaatatcatatggcaaccccagacgtgtagcatgcttaaatcctaaatgt
ggtaaaaaaatagatgaagaaaaaatagttgggaaatgccctaaatgtggaaatgattta
ataataaaatcagggagatatggtaagtttgtaggttgtaaaggattcccaaaatgtaaa
tatgtaagatctatttga
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