Methanothermus fervidus: Mfer_0180
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Entry
Mfer_0180 CDS
T01351
Name
(GenBank) TATA binding protein of transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mfv
Methanothermus fervidus
Pathway
mfv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mfer_0180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfv03000
]
Mfer_0180
03021 Transcription machinery [BR:
mfv03021
]
Mfer_0180
Transcription factors [BR:
mfv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Mfer_0180
Transcription machinery [BR:
mfv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Mfer_0180
RNA polymerase III system
TFIIIB
Mfer_0180
RNA polymerase I system
SL1/TIF-1B
Mfer_0180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
ADP76983
UniProt:
E3GXF1
LinkDB
All DBs
Position
complement(178564..179115)
Genome browser
AA seq
183 aa
AA seq
DB search
MGENDLEIEIENIVASATLGRPIDLSKISKALKSVNFNRKQFPGLVYKLDKPKTAALIFG
SGKLVCTGAKSVEDSIKAIKTTVNKIREVDPDIPEDYEIKIQNIVASANLSKPLNLDEIA
MTLENTEYEPEQFPGLVYRLDKPKVVLLLFGSGKVVCTGARDPKDAKLGVKKTKERLKEL
NLI
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgaaaacgatttagagattgaaatagaaaacatagtagcatccgcaacattagga
agacctatagatttatcaaaaatttctaaagctcttaaaagtgtcaatttcaatagaaaa
caatttccaggactagtatataagcttgataagccaaaaactgcagcattgatatttgga
tctggaaaacttgtatgcactggtgcaaaatcagttgaagattcaataaaggctattaaa
acaactgttaataaaataagagaagttgaccctgacatccctgaagattatgaaataaaa
atacaaaacatagttgcctctgctaatctttctaaaccattaaatttagatgagattgcg
atgacattggaaaatacagaatacgaacctgaacaatttccagggttagtgtatcgactt
gataagccaaaggttgtattgcttttatttggatctggaaaagttgtttgtactggggca
agagacccgaaagatgcaaaattaggtgttaaaaaaactaaagaacgtttaaaagagtta
aacttgatttaa
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