Methanothermus fervidus: Mfer_0602
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Entry
Mfer_0602 CDS
T01351
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mfv
Methanothermus fervidus
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfv03016
]
Mfer_0602
Enzymes [BR:
mfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Mfer_0602
Transfer RNA biogenesis [BR:
mfv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Mfer_0602
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
PhaP_Bmeg
Motif
Other DBs
NCBI-ProteinID:
ADP77401
UniProt:
E3GYL9
LinkDB
All DBs
Position
582570..583124
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AA seq
184 aa
AA seq
DB search
MRTFLAIDLDSELHQKVIEIQKKLKETKADIKFVTPENLHFTLKFFGNIDEKQLNEISNI
VKKSIEDFHEFELHLKGIGVFPNKKYIRVIWIGVDNPEYFIKLQKKLDIEFNKIGFDLER
DYVPHLTIGRVKTARNKDRLIKKINELENVTVGSMKVKELSLKKSILRPEGPKYKDLQIF
TLSK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgagaacttttttagctattgatctcgattcagagttacatcaaaaagtaattgaaatt
cagaaaaaattaaaggaaactaaagcagacataaaatttgtaacacctgaaaatttacat
tttacacttaaattttttggtaatattgatgaaaaacaattaaatgaaatatcaaatatt
gttaaaaagagtatagaagattttcatgagtttgaattgcatctgaaaggcattggagtt
tttccaaataaaaaatatattcgtgtcatttggattggtgtagacaatcctgaatatttc
atcaagttacagaaaaaattagacattgaatttaataaaataggttttgatttggaaaga
gattacgttcctcatttaaccattggcagggtaaaaactgcaagaaataaagatagatta
atcaaaaaaataaatgaattagaaaatgtaactgtaggttcgatgaaagttaaagaatta
tctctcaaaaaaagtatattgaggcctgaaggtccaaagtacaaagacttacaaatattc
actcttagtaagtga
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