Methanothermus fervidus: Mfer_0824
Help
Entry
Mfer_0824 CDS
T01351
Name
(GenBank) ribosomal RNA-processing protein RRP41/SKI6
KO
K11600
exosome complex component RRP41
Organism
mfv
Methanothermus fervidus
Pathway
mfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfer_0824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfv03019
]
Mfer_0824
Messenger RNA biogenesis [BR:
mfv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mfer_0824
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Mfer_0824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
OsmC
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
ADP77623
UniProt:
E3GZ91
LinkDB
All DBs
Position
793993..794703
Genome browser
AA seq
236 aa
AA seq
DB search
MIIVPDTVEFVRKDGRAYNELRPVKIKAGVLKRADGSSYIELGSNKILAAVYGPRDPQIT
KIKRPDRAIIRCRYNMAPFSVEERKRPGPDRRSIEISKITAEALAPSIILEKFPRSSIDI
FIEVLEADGGTRCAGITAASVALADAGIPLRDLVVACSAGKVNGHVVLDLTEEEDKEGEA
DVPVAIMPRTKEITLLQVDGELTPEELEKAIDLAIEGCMSINKLQKKSIERKIWVY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtgccagatacagtagaattcgttagaaaagatggaagagcatacaacgaa
cttcgaccagtaaaaattaaagcaggagtattaaaaagagcagatggatcatcctatatt
gagttagggtccaataaaatattagcagcggtatatggtcctagagatcctcaaataaca
aaaataaagagaccagatagggcaataattaggtgtagatacaatatggcaccattttct
gtagaggaacgaaaaagaccaggacctgatagaagatcaatagagatttcaaaaataaca
gcagaagctttagcgccttctataattttagaaaaatttccaagatcatcaattgatatt
ttcattgaagttttggaagcagatggtggaacaagatgtgcaggaataactgctgcatct
gttgcacttgcagatgcaggaatacctcttcgtgatttggtagtcgcatgttcagcaggt
aaagttaatggtcatgtagtattagatttaactgaagaagaagataaagaaggtgaagca
gacgttcctgtggcaataatgcccagaactaaagaaataacattattacaagttgatgga
gaattgacacctgaagaacttgaaaaagctatagatcttgctattgaaggttgtatgagt
ataaataaacttcaaaaaaaaagcattgaaagaaaaatatgggtgtattga
DBGET
integrated database retrieval system
