Methanothermus fervidus: Mfer_0898
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Entry
Mfer_0898 CDS
T01351
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mfv
Methanothermus fervidus
Pathway
mfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfer_0898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfv03019
]
Mfer_0898
Messenger RNA biogenesis [BR:
mfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mfer_0898
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
ADP77696
UniProt:
E3GZG4
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All DBs
Position
852879..854231
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AA seq
450 aa
AA seq
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MDVEIISIGGYEEVGKNMTAVKVGKDIVIFDMGIHLDRVHIHEDTNLARMHSLELINRGV
IPDDTIMRNVDGNVRAIVFTHGHLDHIGAVTKLAEKYNAPIISTPYTLGLIERMLKSEKK
FNVLKRLQVLKGGEKCQISSNIILEFIHVTHSIPHSVIAVLHTPVGAIVYALDFKFDNHQ
IISPPPQYSRLRKLGKENVFALIVESTRVGEVCEVKTHSERIARFVLEDIMKNLLDEKVG
IIITTFSSHIERIQAIADIVEENSNRHMLILGRSMERYCSIAENMELLKLPENASIYGNP
KAVSQALARATANKEDYVLITTGHQGEPDALLPRIANSKTPYKIQKTDNIIISAPVIPHP
VNTANRYLMEKRLQARGARIFTDVHVSGHAGREDHRDLIRMLNPMHIIPAHGDLQMLSAY
AELAEEEGYNLGEDIHLLRNGQAQVFEGGQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgaaataatttcgataggaggctacgaagaagtaggtaaaaatatgactgca
gtcaaagttgggaaggacatagtaatttttgacatgggcattcatctagatagagtacat
attcatgaagatactaatctagcacgtatgcacagtctagaactgataaataggggtgta
atacctgatgacacaattatgagaaacgtggatgggaatgtacgtgcaatagtttttact
catggccacttagatcatattggagctgtaacaaagcttgcagaaaaatataatgcacct
ataatatcaactccctacacattaggattaatagaaaggatgttaaaaagtgagaaaaaa
tttaatgtacttaaacgtttacaagttctaaaaggtggggaaaagtgtcagatatcctct
aatataatactggaattcatacatgtgacacatagtattccccattcagttattgcagtg
ttacacacaccagttggagcaatagtttatgcacttgactttaaatttgataatcatcag
ataatatcaccaccaccgcaatactcaagattgagaaaacttggcaaagaaaatgttttt
gcattaatagttgagtcaactagagttggggaagtttgtgaagttaaaacacattcagaa
agaattgcaagatttgtacttgaagacataatgaaaaatcttttagatgaaaaagttgga
ataataataacgacattttcttcacatatagaacgtattcaagcaatagctgatattgtg
gaggagaacagcaatagacacatgttaatccttggaagatctatggaacgttattgtagt
atagctgaaaatatggaacttttaaaattacctgaaaatgcaagtatatatggaaatcca
aaagcagtgtcacaagcacttgccagggcaaccgctaataaagaagactatgtacttata
accaccggacaccagggggaaccagatgcattgcttcctagaatagcaaattcgaaaaca
ccatacaaaatacagaaaacagacaacattataatttctgctccagtgattccacatcct
gtaaatactgcaaacagatatcttatggaaaaacgtcttcaagcaagaggagcaaggata
tttacagatgtgcatgtttcaggacatgctggaagagaagaccatagagacctaattaga
atgctaaatccaatgcatataataccagctcatggtgacctccagatgttatcagcatat
gcagaacttgcagaagaggaaggttataatcttggtgaagatatacatcttcttcgaaat
ggtcaggcacaagtttttgaaggaggacaataa
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