Methanothermus fervidus: Mfer_1014
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Entry
Mfer_1014 CDS
T01351
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
mfv
Methanothermus fervidus
Pathway
mfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mfer_1014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfv03019
]
Mfer_1014
Messenger RNA biogenesis [BR:
mfv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mfer_1014
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Mfer_1014
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
ECR1_N_2
Zn_ribbon_TiaS
C1_1
DUF5816
OB_MEIOB_N
DmmA-like_C
Zn_ribbon_TFIIB
CPxCG_zf
Motif
Other DBs
NCBI-ProteinID:
ADP77809
UniProt:
E3GW44
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All DBs
Position
964588..965187
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AA seq
199 aa
AA seq
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MKTKVKSGDLVLPGDTLGISEEFIPLHNTYEENGKIKSLIVGRVLKDYRNKTISVMPCLE
LPPILKKNTHVIGEVIDIKEEKIALVRLLGVKGLKRPIFTNLIAGIYLPNVQRAYLNKMS
DAFHIGDIVEAKIHEMLGLSYISLRTVEKDLGVIRALCTKCRNPMAKIGRNLVKCTNCGN
IEKRKLSINYIIKGEKNEN
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaagtaaaaagtggagatttagtacttccaggagatacattaggtataagc
gaagaatttattcctctccacaatacttatgaagagaatggtaaaataaaatctttaatt
gtagggcgagtattaaaggattatagaaataagactatttctgtgatgccatgcttagaa
ttacctcctattttaaagaaaaatacacatgtaattggtgaagtaattgatattaaagaa
gagaagatagcattagttagacttctgggtgtcaaagggcttaaaagacctatttttact
aatttgatcgctggaatttatcttccaaatgttcaaagagcttatttaaataaaatgagt
gatgcattccatattggcgacattgtggaagctaaaattcatgaaatgttagggttaagt
tatatatctttaagaacagttgaaaaagatttaggagtgataagagctctctgtactaaa
tgtagaaatcctatggcaaagattggaagaaatcttgtaaaatgtacgaattgtgggaat
atagagaaaagaaaactttctatcaactatatcataaagggggagaaaaatgaaaattaa
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