Methanothermus fervidus: Mfer_1195
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Entry
Mfer_1195 CDS
T01351
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mfv
Methanothermus fervidus
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfv03016
]
Mfer_1195
Enzymes [BR:
mfv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Mfer_1195
Transfer RNA biogenesis [BR:
mfv03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Mfer_1195
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
HU-HIG
Sen15
DUF5854
Motif
Other DBs
NCBI-ProteinID:
ADP77981
UniProt:
E3GWR2
LinkDB
All DBs
Position
1142871..1143377
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AA seq
168 aa
AA seq
DB search
MRCQLIRDSVVSDVNPRALRLHNKSHYGILDGNTFKLSLIEATYLLENKRINVYRGNEKI
SLEEMKNILRRHNLYQKYLVFRDLRNRGYIVKTGLKYGSEFRLYERGKAPGKGHSKYLVR
VVTEDDIFNVKDIVSQVRVAHSVRKKLIMAVVDEEEDISYYKIEWIRP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtcaattaattagagacagtgttgtatcagatgtgaatccccgtgccctcaga
cttcataacaaaagtcattatggaattctagatggaaatactttcaaattatcattaata
gaagctacttatttgttagaaaataaaaggattaatgtgtatagaggtaatgagaagatt
tctctagaagaaatgaaaaatattttgaggagacataatttatatcagaaatatttagtg
tttagagatttaaggaatagaggatatatagtcaaaactggacttaaatatggttctgaa
tttcgtttatatgaacgtggtaaagcacctggtaaaggacattccaaatatcttgttaga
gtagtgacagaagatgacatatttaatgttaaagatattgtaagccaagtaagagttgca
catagtgtgagaaaaaaattaattatggcagtagtagatgaagaagaagatatcagctat
tacaaaattgaatggataagaccttga
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