Methanothermus fervidus: Mfer_1296
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Entry
Mfer_1296 CDS
T01351
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mfv
Methanothermus fervidus
Pathway
mfv03410
Base excision repair
mfv03430
Mismatch repair
mfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mfer_1296
03430 Mismatch repair
Mfer_1296
03440 Homologous recombination
Mfer_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfv03400
]
Mfer_1296
DNA repair and recombination proteins [BR:
mfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mfer_1296
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mfer_1296
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mfer_1296
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
BCDHK_Adom3
Motif
Other DBs
NCBI-ProteinID:
ADP78082
UniProt:
E3GX87
LinkDB
All DBs
Position
complement(1235974..1237341)
Genome browser
AA seq
455 aa
AA seq
DB search
MKSELLHKFLHAKKVIEEAENVNIYTHIDCDGICAGAILSYLMEELGKDYKIEFINIDEI
DGVDMDSDLTIFSDLGSGQELEEKGKILILDHHPPIRKPKDDKNFIEINPMFYGIDGSTE
ISGGGLAYLLSKTFNLKELSWIGVLSAIGDMQNSIGQLRGLNRYILNDSISLKLLKVSKD
LTIYGRQTRPIHIALSYFNDVKLPITNNKTECILLLKKLKIPRKDGEKWRTLSDLNGEEK
KKLFIELIKMLNKEVPRKYSKYLPKLISGEVYDFLPEERYSLLRDLTEFSTAINACSRNK
KFDIALKILKGERGNTLKKLEKILREHRRYLAKSVKSVRYAISQEKNLQYFIDDIKPEAI
GSVANLALSYGDWRKPILGLTYVDENYVKVSLRCSRLFYFKNIHFGKLIKKISEKVGGNG
GGHAVACGAYIPQDREADFIDLFDQILDNKLGVPI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgagttacttcataaatttctacatgcaaaaaaagttattgaagaagcagaa
aatgtaaacatatacacacatatagattgtgatggaatatgcgcaggtgcaatattatct
tatttaatggaagaattaggcaaagattataaaatagaatttattaacattgatgaaatt
gatggagtggacatggattctgatctcacgattttttctgatttgggctctgggcaagaa
ttagaagaaaaaggtaaaatattaattctagatcatcatccgccgattcgtaagccaaaa
gatgataaaaattttatagaaataaaccccatgttttatggaatagatgggtcaacagaa
atttctgggggaggtttagcatatctattatctaaaacttttaatttaaaggaattgagc
tggattggggtattatctgcaattggagatatgcaaaatagcattggtcagcttagagga
ttaaataggtacatattgaatgatagtatcagtttaaagttattaaaagtttctaaagat
cttacaatatatggtaggcaaactaggcctatacatattgcattatcttattttaatgat
gttaagctgccaataactaataataagacagaatgtattttattacttaaaaaattgaaa
atacctcgtaaagatggtgaaaagtggaggactctatctgatcttaatggagaagaaaag
aaaaaactttttatagaactaataaaaatgcttaataaagaggttccacgaaaatattca
aaatatcttccaaaacttattagtggagaagtatatgattttttacctgaagaaagatat
tcattgttaagagatctaacagaattttcaactgccataaatgcatgtagtagaaataaa
aagtttgatatagcgcttaaaattttaaaaggtgaaagagggaacactttaaagaaattg
gaaaagatattaagagaacatagaaggtatttagcaaagagtgttaaatctgtgagatat
gctatatcacaagaaaaaaatttacaatatttcatagatgatataaaacctgaggcaatt
ggttcggttgctaatttggcattgtcttatggtgattggaggaaaccaatacttggtctt
acatatgtagatgaaaattatgtaaaagtgtctttacgttgctctagattattttacttt
aaaaatatacattttggtaaactcataaagaaaatatctgaaaaagttggaggaaatgga
ggaggacatgccgtagcttgtggtgcatatatacctcaagatagggaagcagatttcata
gatttgtttgatcaaattttagataacaaattaggagtgcctatatga
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