Mesoplasma florum W37: mflW37_0630
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Entry
mflW37_0630 CDS
T02878
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mfw
Mesoplasma florum W37
Pathway
mfw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
mflW37_0630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfw03400
]
mflW37_0630
DNA repair and recombination proteins [BR:
mfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
mflW37_0630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
mflW37_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_21
nSTAND3
RsgA_GTPase
AAA_14
AAA_22
APS_kinase
ATPase
NACHT
cobW
AAA_18
AAA_23
NB-ARC
MeaB
YobI-ATPase
Viral_helicase1
DnaJ_CXXCXGXG
NTPase_1
T2SSE
PRK
SF3a60_Prp9_C
Motif
Other DBs
NCBI-ProteinID:
AGY41130
LinkDB
All DBs
Position
1:79378..82227
Genome browser
AA seq
949 aa
AA seq
DB search
MENKIVIKGARENNLKNVDLEIPKNKLVVFTGLSGSGKSSLAFATIYAEGRRRYIESLSA
YARQFLGGNEKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARVGTPY
CINGHGQIHAATIKEIINNIKSTTEDNEQVYVLSPVVRDKKGTHKDLLAKLLAEGFIRVS
INGEIKMLEEEIILDKNQRHNIDIVVDRLIYHNDDEVHSRLFSAIEIALQYSNSLVKIKY
PETENKEDNLFSNSYSCNVCGFNIPELEPRLFSFNAPLGACGDCDGLGVRLVSDPELIIP
DKSLSINQGGVVYFKNFLNTDNLEWQKFKILCDYYYIDMNLPIDQLTNKQIKAILRGSEE
QIEIKLLSSSGRRYDSYDFVEGVADLVQRRYFETKSEEIRKWYTKFMSSSVCQSCDGARL
NPTALSIKIADKNIFDFTKMSIQDELEFILNVELTQTQAQIANLVLTEITNRISFLNEVG
LGYLDLARTATTLSGGEAQRIRLAKQIGSQLTGILYVLDEPSIGLHQRDNDKLIKTLKHL
RDLGNTLIVVEHDEDTMKTADWIVDVGPQAGEHGGQITFSGTYDEILKSDTITGRYLSGK
ESIPVPKKRRSGNGQKIDIVGARENNLKNVNVSIPLNKFIAITGVSGSGKSTLLEDIIYK
GIRKNLARETIVTGKFSKMNGLENIDKVIFISQEPIGKTPRSNPATYTGVFDDIRDLFTN
LPEAKIRGYKKGRFSFNVPGGRCEHCFGDGVITISMQFMPSVEVVCEICEGKRYNDETLQ
VKFKEKTIADVLNMTVETAAAFFENIPSIKDKLDTILEVGLGYIRLGQSATTLSGGEAQR
IKLSTYLLKKQTGKTMFLLDEPTTGLHIDDVKRLVHVLNKLVDLGNTVVAIEHNLDFIKV
ADHVIDLGPEGGIGGGLIVAAGTPEQVADTKGSYTGTYLKEYLYNDFSR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaatagtaataaaaggtgcaagagaaaataatttaaaaaatgttgactta
gaaataccaaaaaataagctagttgtttttactggcttaagtggtagtggtaaatcatca
ttagcttttgcaacaatttatgctgaaggtagaagaagatatattgaatctctttcagca
tatgcaagacaattcttaggtggaaatgaaaaacctgatgttgattcaatcgaaggttta
agccccgcaatttcaattgaccaaaagactacatctcataacccgagatcaactgttgga
actgtgactgaaatttatgattacttaagattactttatgcaagagttgggacaccatat
tgtattaacggtcatgggcaaatacacgctgcaacaattaaagaaattattaataatatt
aaaagtacaactgaagataatgaacaggtttatgttttatctccagttgttagagataaa
aaaggaacacataaggacttactagctaaattgttagctgaaggttttattagagtatct
ataaatggtgaaatcaaaatgttagaagaagaaatcattttagataaaaatcaaagacat
aatattgatattgttgttgatcgcctaatctatcataatgatgatgaagttcattcaaga
cttttctctgcaattgaaatcgctttacaatattcaaatagtttagtgaaaataaaatat
cctgaaactgaaaataaagaagataatttattttcaaactcatactcatgtaatgtttgt
ggatttaacataccagaattagaaccaagattattttcatttaatgcaccgttaggagca
tgtggagattgtgatggtttaggtgtaagattggtttctgacccagaactaataattcca
gataaatctttgtcaattaatcaaggaggagttgtttactttaaaaactttttaaataca
gataatttagagtgacaaaaatttaaaattttatgtgattactattacattgatatgaat
ttgccaattgatcaacttactaataaacaaattaaagcaattcttagaggtagtgaagaa
caaattgaaataaaactattaagtagtagtggaagaagatatgattcatatgattttgtt
gaaggagttgctgatttagttcaaagaagatattttgaaacaaagtctgaagaaattaga
aaatgatatacaaaatttatgtcttcaagtgtttgtcagtcatgtgatggggctagatta
aatccaacagcattatcaataaaaattgctgataaaaatatttttgattttacaaaaatg
agcatacaagatgaattagaatttattttaaatgttgaattaactcaaactcaagcacaa
atagcaaacttagttttaacagaaattacaaatagaataagttttttaaatgaagttgga
ttaggttatttagatttagcgagaactgcaacgactttatctggtggagaagcacaaaga
attaggttagcaaaacaaattggtagtcaactgacaggtattttatatgtacttgatgaa
ccatcaattggattacatcaaagagataacgataaactgataaaaacattgaaacattta
agagatcttggaaatactttaatagttgttgaacatgacgaagatacaatgaaaacagct
gattgaattgttgatgttggacctcaagctggtgagcacggaggacaaattacatttagt
ggtacttatgatgaaatattaaagtcagacacaataacaggtagatatttatctggtaaa
gaatctattcctgttcctaaaaaacgtagaagtggtaacggacaaaaaattgatattgta
ggcgcaagagaaaataacctaaaaaatgttaatgtctctattccattaaataaatttatt
gcaattacaggagtaagtggtagtggtaagtcaactttattagaagatattatttataaa
ggtataagaaaaaatctagcaagagaaacaatagtgactggaaaattcagtaaaatgaat
ggtctagaaaatattgataaagttatttttatttcacaagaaccaattggtaaaacacca
agatcaaaccccgcaacttacacaggtgtatttgatgacataagagatttatttacaaat
ctacctgaagctaaaattagaggatacaaaaaagggagattttcatttaacgtacctggt
ggtagatgtgaacattgttttggtgatggtgtaataacaatttcaatgcaatttatgcca
agtgttgaagtggtttgtgaaatttgtgaaggaaaaagatataacgatgaaactttacaa
gttaaatttaaagaaaaaacaatagctgatgttttaaatatgactgttgaaacagctgca
gccttttttgaaaacattccaagtatcaaagataaattagatacaattcttgaagttgga
ttaggatatataagattaggtcaatcagctacaaccttatctggtggagaagctcaaaga
attaagttatctacttatttactaaaaaaacaaacaggtaaaacaatgttcttattagat
gaaccaacaactggtttacatattgatgatgttaaaagattagttcatgttttaaataaa
ttagtagacttaggaaacactgtagtagcaatcgaacataatttagactttattaaagtc
gctgaccacgttatcgatttaggaccagaaggtggaattggtggtggattgattgttgct
gctggaacaccagaacaagttgctgatacaaaaggttcatatacaggaacttatttaaag
gaatatttatataatgatttcagtagataa
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