Mesoplasma florum W37: mflW37_3400
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Entry
mflW37_3400 CDS
T02878
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mfw
Mesoplasma florum W37
Pathway
mfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
mflW37_3400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfw03400
]
mflW37_3400
Enzymes [BR:
mfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
mflW37_3400
DNA repair and recombination proteins [BR:
mfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
mflW37_3400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
SH3_13
AAA_11
UvrD_C_2
OB_YrrC
PIF1
SLFN-g3_helicase
PhoH
HHH_RecD2
NPHP3_N
nSTAND3
UvrD-helicase
AAA_22
AAA_28
RsgA_GTPase
AAA
AAA_12
AAA_14
Mg_chelatase
ABC_tran
Helicase_RecD
AAA_5
TsaE
T2SSE
DEAD
NACHT
AAA_18
AAA_29
NTPase_1
cobW
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AGY41407
LinkDB
All DBs
Position
1:386092..388323
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AA seq
743 aa
AA seq
DB search
MNELLTFRGYVVKYGFSNDAGWGTGTFASEDNLKQHMSIKGSITSMDKKTLYEITGYFEE
HPRYGKSFNVQTYRKAPIHSTKEQIKFLAGPAFPGVGEKTAEIIINHLGDKAITQLVKNI
ELLNEIPGLNAIYIPIIKKGIEENIRQEGQERLRYIFFENNLKTSILDWMDNHFDQDNDI
IESIFSNSFLSFAKDKEIASFEELDKVAVYFGLELHSPERIAYWAWKLADDFLFASGDTY
TNKDYLSRSLMRKLKIQDTELLFEGILYAKEKGILKLTKNRIYTEESWREEQIIADNIIK
LNIPTKNANKEGISWEINQIEEEIAYENKIKDFKFDEKQREALELFANNKLSIITGGPGT
GKTTLIKGIVKLFNRMSGTEDYAIATPTGRAAARIRETYKKSYATTIHKLLEAKELNKFQ
ITQNNPLNQKLVILDECSMIDNKLFASFIQSCDRVRKVVLVGDANQLPSVGYGNTFADLL
ELDFLKTIKLDTVHRQKNGNGIVDLAYKVLNETLEISDLETMSNVEINFDYNNQNTMNKV
TEIVGQHWDDLEKRANHLQVICPMYGGGLGIDEINAQIQNEFNENVKDKKKVYDRGDYRF
VVEDKIMFLKNDTDLDLANGDVGKIIKINYDAIGRLKDVLTEFNDKEILLQPKNFSDVKL
SYATSVHKTQGSEYNNVLLVIDSPKFNSGFINKTLIYTAVTRAKDKIVILGDSDLFFNAI
KITPPRRNTTLIETMLEKREING
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattattaacttttagaggatatgtagttaaatatggtttttcaaatgatgct
ggttgaggaactggtacatttgctagtgaagataatttaaaacaacatatgagtattaaa
ggatcaataactagtatggataaaaaaactctatatgaaataactggatattttgaagaa
catcctcgttatggtaaaagttttaatgttcaaacttatcgaaaagcacctattcactca
actaaagaacaaattaaatttttagcaggtcctgcatttccaggtgtaggagaaaaaaca
gctgaaattataataaatcatttaggtgataaagcaattacacaattagttaaaaatatt
gaattattaaatgaaataccaggacttaatgctatttatatcccaattattaaaaaagga
atagaagagaatatcagacaagaaggtcaagaaagattaagatatatcttttttgaaaat
aatcttaaaacttcaatattagattgaatggataatcactttgatcaagataatgacatt
attgaaagcattttttcaaattcatttttatcttttgcaaaagataaagaaattgcttca
tttgaagagcttgataaagttgctgtttattttggattagaattacactcaccagaaaga
atagcttattgagcttgaaagttagctgatgattttttatttgcatctggagatacttat
acaaacaaagattatctttcaagaagtttaatgcgtaagttaaaaatacaagataccgaa
ttactttttgaaggtattttatatgctaaagaaaaaggtattttaaaattaactaaaaat
cgtatttatacagaagaatcttgaagagaagagcaaattatcgcagataatataataaag
cttaatatacccactaaaaatgccaataaagaaggtatttcatgagaaataaatcaaatt
gaagaagaaatagcttatgaaaataaaattaaagattttaaatttgatgaaaaacaaaga
gaagcattagaattatttgccaataataaattatctattattactggtggaccaggaact
ggtaaaacaacattgattaaaggaatagttaaattgtttaatcgtatgagtggtactgag
gactatgcaatagcaacaccaaccggaagagctgctgctagaattagagaaacatacaag
aaatcatatgcaacaacaatacacaaactattagaagcaaaagaacttaataagtttcaa
attacacaaaataatccattaaatcaaaaacttgtaattttagatgaatgctcaatgata
gataataaattatttgcaagttttatacaatcttgtgatcgagttagaaaagtagtttta
gttggtgatgctaatcaattaccaagtgtagggtatggaaatacatttgctgatttatta
gaactagattttttaaaaacaattaaactagatacagttcatagacaaaagaatggcaat
ggtattgttgacttagcttataaagtgttaaatgagacattagagataagtgatttagaa
actatgagtaatgttgaaataaactttgattataataatcaaaacaccatgaacaaagtt
actgaaattgttggtcaacattgagatgatttagaaaaaagagctaatcatttacaagtt
atttgtccaatgtatggtggtggattaggaattgatgaaatcaatgctcaaattcaaaat
gaatttaatgaaaatgttaaagataaaaagaaagtctatgatcgaggagattatcgattt
gtagttgaagataaaatcatgtttttaaaaaatgacactgatttagatttagctaatggt
gatgtaggtaaaataattaaaattaattatgatgctataggtagattaaaagatgtttta
actgaatttaatgataaagagatattattacaaccaaaaaactttagtgatgtaaaatta
tcttatgcaactagtgtgcataagactcaaggaagtgaatataataatgttttattagtt
atagatagtcctaaatttaattcaggctttattaataaaacattaatttacacagcagta
acaagagcaaaagataaaatagttattttaggtgatagtgatttattctttaatgcaatt
aaaataacaccacctagaagaaatacaacacttattgaaactatgctagaaaagagagaa
ataaatgggtaa
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