Mycolicibacterium fallax: MFAL_21570
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Entry
MFAL_21570 CDS
T06894
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mfx
Mycolicibacterium fallax
Pathway
mfx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MFAL_21570 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfx03021
]
MFAL_21570 (rpoC)
03400 DNA repair and recombination proteins [BR:
mfx03400
]
MFAL_21570 (rpoC)
Enzymes [BR:
mfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFAL_21570 (rpoC)
Transcription machinery [BR:
mfx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MFAL_21570 (rpoC)
DNA repair and recombination proteins [BR:
mfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MFAL_21570 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBY98690
LinkDB
All DBs
Position
complement(2248099..2252049)
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDTEMRHNELSTLEAEMVVEKKRVEDQRDLDLAERSQKLEAD
LAELEAEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFVKLAPKQLIIDENL
YREIVDRYGEYFEGSMGAESIQKLIQTFDIDAEAELLRDIIKNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIADSPGAYA
PADADGPEAGVYSSPAEAIMAMDRGALSARAPIKVRLTHQRPAAAVETELFGANGWRPGD
AWIAETTLGRVLFNELLPMGYPFVNAQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAG
FHWATRSGVTVSMADVLVPPQKKEILDHYEGEADAIEKQYQRGKLNHEERNEALVKIWQE
ATEKVGKALEDYYPEDNPITLLPKSGATGNLTQVRNLAGMKGLVTNPKGEYIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGITVT
IAERQPDGTLIRDAHVETSAFARTLAADAVDANGAVIIERGHDLGDPAIDALLAAGITAV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GGDITGGLPRVQELFEARVPRARAPIADVSGRVQLEEGDKFYKITVVPDDGGEEVVYDKL
PRRQRLKVFKHEDGEERPLANGDHVEVGQQLMEGSADPHEVLRVQGPRAVQVHLVDEVQD
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFESENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPA
GTGISRYRNIQVEPTEEARAAAYTIPSYEDQYYSPDFGQSTGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgagctccgcatcggcctggccaccgcggaggacatc
cgtaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggtcacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtgccgagccggctgggctacctgctggacctg
gctcccaaggacctggaaaagatcatctacttcgcggcgtatgtgatcaccgccgtcgac
accgagatgcgccacaacgagctgtccacgctcgaggcggagatggtggtggagaagaag
cgggtcgaggatcagcgtgacctcgacctggccgagcgctcgcagaagctggaggccgac
ctggccgagctggaggccgagggcgccaagagcgacgtcaagcgcaaggtgcgggacggc
ggcgagcgcgagatgcgtcagctgcgggaccgtgcccagcgtgagctggaccggctcgac
gagatctggaccaccttcgtcaagctcgcccccaagcagctgatcatcgacgagaacctc
taccgcgagatcgtcgaccgctacggcgagtacttcgagggctcgatgggcgccgagtcg
atccagaagctcatccagaccttcgacatcgacgccgaagccgagctgctgcgcgacatc
atcaagaacggtaagggccagaagaagctgcgtgcgctcaagcgactgaaggtcgtcgcc
gcgttccagcagtccggcaactcgccgatgggcatggtgctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggtgcagctcgacggtggccggttcgccaccagcgacctc
aacgacctgtaccgccgggtgatcaaccgcaataaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccggcccgggcaaccgcccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccggcagaacctgctgggcaag
cgcgtcgactactcgggccgctcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctgccgaagctgatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtcgagcggcagcgc
gcccaggtgtgggacgtgctcgaagaggtcatcgccgaacacccggtgctgctcaaccgc
gcccccacgctgcaccgcctgggcatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagcgccgaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtccccggcgtccggccgcccgctggccatgccccggctggac
atggtgaccgggctgtacttcctgaccaccgagatcgccgactccccgggggcctacgcc
cccgccgacgccgacggcccggaggccggcgtgtacagcagcccggccgaggccatcatg
gcgatggaccgcggtgcgctgagcgcccgcgcgccgatcaaggtgcggctgacccaccag
cgtccggccgccgccgtggagaccgagctgttcggtgccaacggctggcgtcccggcgac
gcctggatcgccgagaccaccctgggccgggtgctcttcaacgagctgctgccgatgggc
tacccgttcgtcaacgcgcagatgcacaagaaggtgcaggcggcgatcatcaacgatctc
gccgagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgccggc
ttccactgggcgacccgctccggcgtgacggtctcgatggccgacgtgctggtgccgccg
cagaagaaggagatcctcgaccactacgagggcgaggccgacgcgatcgagaagcagtac
cagcgcggcaagctcaaccacgaggagcgcaacgaggccctggtcaagatctggcaggag
gccaccgagaaggtcggtaaggctctggaggattactacccggaggacaacccgatcacc
ctgctgccgaagtcgggtgccaccggcaacctgacccaggtgcgcaacctggccggcatg
aagggcctggtgaccaacccgaagggcgagtacatcccgcgtccgatcaagtcttcgttc
cgcgagggcctgacggtgctggagtacttcatcaacacccacggtgcccgcaagggtctg
gccgacaccgcgctgcgtaccgccgactcgggctacctgacccgtcgtctggtggacgtc
agccaggacgtcatcgtccgcgagcacgactgcggaaccgagcggggcatcaccgtcacc
atcgccgagcgtcagcccgacggcacgctgatccgcgacgctcacgtcgagaccagcgcg
ttcgcccggaccctggccgccgacgcggtcgacgccaacggcgccgtgatcatcgagcgc
ggtcacgacctgggcgacccggccatcgacgcgctgctggccgcgggtatcaccgcggtg
aaggtgcgttcggtgctgacctgcacgaccggtaccggggtgtgcgcgacctgctacggc
cgctcgatggcgaccggcaagctggtcgacatcggcgaggccgtcggcatcgtcgccgcg
cagtccatcggtgagcccggcacgcagctgaccatgcggaccttccaccagggtggtgtc
ggtggcgacatcaccggcggtctgccgcgggtgcaggagctgttcgaggcccgggtgccg
cgggcgcgggccccaatcgccgacgtcagcggccgggtgcagctggaggagggcgacaag
ttctacaagatcaccgtcgtccccgacgacggcggcgaggaagtcgtctacgacaagctg
ccgcgacgccagcgcctgaaggtgttcaagcacgaggacggcgaagagcgtccgctggcc
aacggtgaccacgtcgaggtcggccagcagctgatggagggctcggccgatccgcacgag
gtgctgcgggtgcagggtccgcgtgcggtgcaggtccacctcgtcgacgaggtgcaggac
gtgtaccgggcgcagggcgtgtcgatccacgacaagcacatcgaggtgatcgtccggcag
atgctgcgccgggtgaccatcatcgactcgggcgccaccgagttcctgcccggttcgctg
accgagcgcggcgagttcgagtcggagaaccggcgcgtggtggccgagggcggcgagccc
gcggccggccgtccggtgctgatgggcatcaccaaggcgagcctggccaccgactcctgg
ctgtcggcggcctccttccaggagaccacccgggtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctccagggcctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggcaccggcatctcccggtaccgcaacatccaggtggagcccaccgaggaggcccgggcg
gcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggtcagagc
accggcgccgcggttccgctggacgactacggctacagcgactaccgctag
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