Mycolicibacterium fallax: MFAL_25820
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Entry
MFAL_25820 CDS
T06894
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mfx
Mycolicibacterium fallax
Pathway
mfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MFAL_25820 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfx03400
]
MFAL_25820 (recB)
Enzymes [BR:
mfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MFAL_25820 (recB)
DNA repair and recombination proteins [BR:
mfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MFAL_25820 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
AAA_22
UvrD_C_2
AAA_25
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBY99115
LinkDB
All DBs
Position
complement(2690384..2693716)
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AA seq
1110 aa
AA seq
DB search
MNQSTELDPFDLWAELPAAGTTTVLEASAGTGKTYALAALVARYLAEGRATLDEMLLITF
TRAATRELRERVRAQLLNAVEAFGRPESVTDDVLRRLVDVPAAEAEVRAKRLRDALAAFD
DASVTTTHGFCQLVLRSLGVAGDSDSNVTLVENLDDLVSEITDDLYLAGFAHAEDRPVMT
RADAGKLAKEVVAHPGVELRPADPAPGTPAAVRRDFAGKVLAELEIRKRRDRILSYDDLL
SRLAGALQAGGADAARARMRSRWKVVLVDEFQDTDPIQWQVLESAFDGYAALILIGDPKQ
AIYAFRGADINTYLRAADGAAVRKTLNRNWRSDARLVASLQTLLGGAALGDPRIRVHPVD
AQHPGSRLTGPSCEAPIRLRIADRDAVGVPPNKPLSIEVLRAHIAADLVGDVARMLAGGV
RFDGSPLSAGDIAVITERNEDAVRCYEGLLAAGIPAVFTGDLDIFGTEAAADWLTLLEAF
DQPDRTGVVRAAGATVFFGETAATLAAGGPELTDRLAETLREWADHARGRGIAAVLEAAQ
LAGMSQRLLGHTGGERSMTDLTQLSHLLSEAAHRDRLSLPGLRDWLRRRRTERDGMGERR
RRLDSDADAVQVLTVWGSKGLQFPVVYLPYSFNRYLGEPDFPRYHDGDVRCLHIGGDSGP
QRQQAVSAAQAETAGETLRVSYVALTRAQSQLVLWWAPSWNEPTGGVSRLVRGRRPGQSE
VPAACLPMESDDVVPEAFAEWEAAGALVVEPSEIRAVEPVARERPSAELAVREFTRTLDT
GWRRTSYSALLRAAEGVLPASGVGSEATDAGKDDETHTVDGGVAAGPSAVSEGALISPMA
QVPAGAELGSLVHAVLEVADPAAADLTAELTAQVRAQQKWWPVAVSAEELGAALLPMHDT
PLGPLAGGLTLRNIGHRDRLCELDFEIPLAGGDGCADAPRITVARIGELLAARLSPDDPL
VGYAERLMTPELGGQPLRGYLSGSIDVVLRVPGRRYLIVDYKTNKLGDPARPLTSADYGQ
SQLVAAMEHSHYPLQALLYSVVLHRFLRWRQPNYDPDRHLGGVLYLFLRGMCGPETPAVD
GVPAGVFSWAPPAKLIVELSDLLAAQEVRA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagagcaccgaactggacccgttcgacctgtgggccgagctgcccgccgccggc
accaccacggtgctggaggccagcgcgggcaccggcaagacctacgcgctggccgccctg
gtggcccgctacctcgccgagggccgggccaccctcgacgagatgctgctgatcaccttc
acccgcgccgccacccgcgaactgcgtgaacgggtccgcgcccagttgctcaacgccgtc
gaggcgttcgggcgcccggagtcggtcaccgacgacgtgctgcgccggctcgtcgacgtg
ccggcggccgaggccgaggtccgggccaagcggctgcgcgacgcgctggccgcgttcgac
gacgccagcgtcaccaccacccacggtttctgccagctggtgctgcgctcactgggggtg
gccggggactccgacagcaacgtcaccctggtggagaacctcgacgacctggtctcggag
atcaccgacgacctctacctggccggcttcgcccatgccgaggaccggccggtgatgacc
cgggccgacgccgggaagctggccaaggaggtggtggcccatcccggcgtcgagctgcgg
cccgccgacccggcacccggcacccccgcggccgtgcgccgcgacttcgccgggaaggtg
ctggcggagctggagatccgcaaacgccgggaccggatcctgagctacgacgacctgctg
tcccggctggccggcgcgctgcaggccggcggcgccgacgccgcccgggcccggatgcgc
agccgctggaaggtggtgctggtcgacgaattccaggacaccgacccgatccagtggcag
gtgctggagtccgcgttcgacgggtacgccgcgctcatcctgatcggcgatcccaagcag
gccatctacgccttccgcggcgccgacatcaacacctacctgcgcgcggccgacggtgcc
gcggtgcgcaagacgctgaaccgcaactggcgcagcgatgcgcggctggtcgcgtcgctg
cagacgctgctcggcggcgccgcgctgggggacccgcggatccgggtgcacccggtcgac
gcgcagcaccccggcagccggctgaccgggccgagctgcgaggcaccgatccggttgcgg
atcgccgaccgcgacgccgtcggcgtcccgccgaacaagccgttgagcatcgaggtgttg
cgcgctcacatcgccgcggatctggtcggcgacgtcgcccggatgctggccggcggggtc
cgctttgacggcagcccgctgagcgccggcgacattgccgtcatcaccgaacgcaacgag
gatgcggtgcgctgctacgaggggctgctggccgccggcatcccggcggtgttcaccggt
gacctggacatcttcggcaccgaggccgccgcggactggctgaccctgctggaggccttc
gaccagccggaccgcaccggcgtggtccgggccgccggggcgacggtcttcttcggcgaa
accgccgccaccctggccgcgggcgggccggagctgaccgatcggctcgccgagacgctg
cgggagtgggccgatcacgcccgcggccgcgggatcgccgcggtgctggaggccgcccag
ctcgccgggatgagccagcggctgctgggccacaccggcggcgagcgctcgatgaccgac
ctgacccagctgagccacctgctgtccgaggccgcgcaccgggaccggctcagcctgccc
ggactgcgggactggctgcgccgccgccgcaccgagcgcgacgggatgggggagcgccgc
cgccggctggacagtgacgccgacgccgtgcaggtgctcaccgtgtggggcagcaagggc
ctgcagttcccggttgtctacctgccctactcgttcaaccgctacctcggtgagccggac
ttcccgcgctaccacgacggcgacgtgcggtgcctgcacatcggcggcgattccggaccg
caacgccagcaggcggtttcggccgcgcaggccgaaaccgccggtgaaaccctgcgggtc
agctacgtggcgctgacccgggcgcagtcccagctggtgctgtggtgggcgccgtcctgg
aacgaaccgaccggcggtgtttcccggctggtgcgcggcaggcggccgggccagtccgag
gtgcccgcggcctgcctgccgatggaaagcgacgacgtcgttcccgaggcgttcgccgag
tgggaggccgccggtgcgctggtggtcgaaccgtcggagatccgcgccgtcgaaccggtt
gcccgggaacggccatcggccgagttggcggtccgggagttcacccgaaccctggacacc
ggttggcgccgcacctcctacagcgctctgctgcgcgccgccgagggcgtgctgccggcc
agcggggtcggcagcgaggccaccgacgcgggcaaggacgacgagacgcacaccgtcgat
ggcggggtggccgccggtccgagcgcggtctccgagggtgcgctgatctcgccgatggcg
caggtgcccgccggggcggagctcgggtcgctggtgcacgccgtgctggaggtcgccgac
ccggcggccgccgacctgaccgccgaactcaccgcgcaggttcgggcccagcagaagtgg
tggccggttgcggtgtcggccgaggaactcggtgcggcgctgctgccgatgcacgacacc
ccgctcggtccgctggccggcggtctgacgctgcggaacatcggccaccgagaccgactg
tgcgagctggacttcgagatcccgctggcgggcggggacgggtgtgccgacgcgccgagg
atcacggtggcccggatcggcgagctgctcgcggcgcggctgagccccgacgatccgctg
gtcggctacgccgagcggctgatgacgcccgaactcgggggccagccgctgcgcggctat
ctgtccgggtccatcgacgtggtgctgcgggtgccgggccggcgctatctcatcgtcgac
tacaagaccaacaagctcggtgatccggcgcgcccgctgacctctgccgactacgggcag
tcgcagctcgtcgccgccatggagcactcccactacccgctgcaggcactgttgtattcg
gttgtgctgcatcggttcctgcgctggcggcagccgaactacgaccccgatcggcatctc
ggtggcgtgctgtacctgttcctgcgcggcatgtgcgggccggagaccccggccgtcgac
ggggtgcccgccggggtgttcagctgggcgccaccggcgaaactgatcgtcgaactttcg
gatttgctggccgcgcaggaggttcgcgcatga
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