Mycolicibacterium fallax: MFAL_39260
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Entry
MFAL_39260 CDS
T06894
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mfx
Mycolicibacterium fallax
Pathway
mfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFAL_39260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfx03019
]
MFAL_39260
03009 Ribosome biogenesis [BR:
mfx03009
]
MFAL_39260
Enzymes [BR:
mfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MFAL_39260
Messenger RNA biogenesis [BR:
mfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MFAL_39260
Ribosome biogenesis [BR:
mfx03009
]
Prokaryotic type
rRNA helicases
MFAL_39260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Motif
Other DBs
NCBI-ProteinID:
BBZ00460
LinkDB
All DBs
Position
4050305..4052560
Genome browser
AA seq
751 aa
AA seq
DB search
MTHAEPEQTGDLETAAEPDTAASVAGVSEPAPAAAEPEPEPVSEPEPAAAEPEPVAEPTP
VAESTPPVAEPTPPAPTEAEPVAEPTPVAEAEPDAEAEPVAAPPAPTEPGFADLNIHPAV
LKSLLEVGYETPSPIQAATIPALMAGRDVVGLAQTGTGKTAAFAVPILSKIDPSAKATQA
LVLAPTRELALQVAEAFGRYSAHLPGLTVLPIYGGSSYTVQLSGLRRGAQIVVGTPGRVI
DHLERGTLDLSHLDYLVLDEADEMLQMGFAEDVERILADTPEYKQVALFSATMPSGIRKI
TTKYLNEAVEVSVKAKTATAENISQRYIQVAGPRKMDALTRILETEPFEAMIVFVRTKQA
TEEVADRLRARGFSAAAINGDIPQSMRERTIAALKDGSLDILVATDVAARGLDVERISHV
LNYDIPHDTESYVHRIGRTGRAGRSGSAVLFVSPRERHLLKAIEKATRSTLVEAELPTVD
DVNAQRVTKFRDSITSALSAPGLEMFRRLIEDYERDNDVPMADIAAALALQTRDGGEFLM
APEPVREERRGRDRRDREERGPLRRAGEGFATYRIDVGKRHKVVPGAIVGAIANEGGLHR
SDFGHISIRLDFSLVELPPQLPPDAWKALQHTKIQGLPINLRLDSGGGRGDRGDREGRKG
DRDQRGGWKKDRGAGRDYDRGAGRGERGSDWSPSRDRDRDGKPGKRGYPKSAKPDFDKGG
RSDFGKGGKEFGKSDWNKGAKPDKKPKHKKP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgctgagccggagcagaccggtgacctcgagaccgccgccgagccggacacc
gccgcgtcggtcgcgggggtgagcgaacccgcgcccgccgccgccgagcccgagcccgag
ccggtgagtgaaccggagcccgccgccgccgagcccgagccggtggctgagcccaccccg
gttgccgagtcgaccccgcccgtggccgagccgaccccgccggcaccgaccgaggccgaa
ccggtggccgagcccaccccggttgccgaggcggagcctgacgccgaggcggaaccggtt
gccgctccgccggcaccgaccgagcccggcttcgccgacctgaacatccatccggcggtg
ctgaagtccctgctggaggtcggctacgagacgccgtcgccgatccaggcggccaccatc
ccggcgctgatggccggccgcgacgtcgtcgggctggcgcagaccggaacgggcaagacc
gcggcgttcgcggtgccgatcctgtccaagatcgacccgtcggccaaggccacccaggcg
ctggtgctggcgccgacccgggagctggcgctgcaggtcgccgaggcattcggccgctac
agcgcgcacctgcccgggctgaccgtgctgccgatctacggtgggtcgtcctacaccgtg
cagctgtccgggctgcgccgcggcgcccagatcgtcgtcggcaccccgggccgggtgatc
gatcacctcgagcgcggcacgctggacctctcgcacctggactacctggtgctcgacgag
gccgacgagatgctgcagatgggtttcgccgaggacgtcgagcgcatccttgccgacacc
cccgagtacaagcaggtggcgctgttctcggcgaccatgccgtcgggcatccgcaagatc
accacgaagtacctcaacgaggctgtcgaggtttcggtcaaggcgaaaaccgcgaccgcg
gagaacatttcgcagcgctacattcaggtggccgggccgcgcaagatggacgcgctcacc
cggatcctggagaccgagccgttcgaggcgatgatcgtgttcgtccggaccaagcaggcc
accgaggaggtggcggatcggttgcgggcccgtggtttctccgccgccgcgatcaacggt
gacatcccgcagagcatgcgggagcggaccatcgccgcgctcaaggacggcagcctggac
atcctggtggccaccgacgtcgccgcgcgcgggctggacgtcgagcggatcagccacgtg
ctcaactacgacattccgcacgacaccgagtcctatgtgcaccggatcgggcgcaccggc
cgggcggggcgctcgggcagcgcggtgctgttcgtctcgccgcgtgagcgccacctgctc
aaagcgatcgagaaggcgacccgttccaccctggtcgaggccgagctgccgaccgtcgac
gacgtcaacgcccagcgggtcacgaagttccgcgattccatcacctcggcgctgtcggcc
ccggggctggagatgttccgccggctcatcgaggactacgagcgtgacaacgacgtcccg
atggccgacattgccgcggcgctggcgctgcagacccgcgacggtggcgaattcctaatg
gcgccggagccggtgcgcgaggagcgtcgcggacgcgatcgccgggaccgcgaggaacgc
ggcccgctgcgccgggccggcgagggcttcgcgacctaccgcatcgatgtcggtaagcgg
cacaaggtggtgcccggcgcgatcgtcggcgccatcgccaacgagggcggcctgcatcgc
agcgactttgggcacatcagcatccggttggacttctccctggtggaactgcccccgcag
ctgccgccggacgcctggaaggcgctgcagcacaccaagatccagggcctgccgatcaac
ctgcggctcgactccggtggcggccgcggtgatcgcggtgaccgggagggccgcaagggc
gaccgggaccagcgcggtggctggaagaaggatcgcggggcgggccgggactacgaccgc
ggcgcgggccgcggggagcggggctcggactggagcccgagccgcgaccgcgaccgcgat
ggcaagccgggcaagcgtggttaccccaagagcgcaaagcccgacttcgacaagggtggc
cggtcggatttcggtaagggcggcaaggaattcggcaagtcggactggaacaagggcgct
aagccggacaagaagcccaagcacaagaagccctag
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