Mycolicibacterium fallax: MFAL_40200
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Entry
MFAL_40200 CDS
T06894
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mfx
Mycolicibacterium fallax
Pathway
mfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MFAL_40200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfx03021
]
MFAL_40200 (rho)
03019 Messenger RNA biogenesis [BR:
mfx03019
]
MFAL_40200 (rho)
Transcription machinery [BR:
mfx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MFAL_40200 (rho)
Messenger RNA biogenesis [BR:
mfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MFAL_40200 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_25
Rho_N
Fungal_virus_P2_C
NACHT
AAA_22
S1CSD-TOTE-2
VWA_2
AAA
Motif
Other DBs
NCBI-ProteinID:
BBZ00554
LinkDB
All DBs
Position
4147714..4149411
Genome browser
AA seq
565 aa
AA seq
DB search
MRKGDLIAAIREHQAGGSGNGGGAAKAGSVKSEAPAPSAAPKEEGPKVEPAQAEAPKSEA
PKSEAPRQDAKSGDQGDGGGQSGEPRRRERRGASRDAGSPTGQGGGQESRGDQDQKSDRG
DGGQQRANSGGGNTGGGNSGGGNADDDDARGGRRGRRFRDRRRRERGGGEGGDTELREDD
VVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAVTGAVRVPREGEG
GGGDKNQRQKFNPLVRLDSVNGGPVEAARNRPEFGKLTPLYPNQRLRLETTPDKISTRVI
DLIMPIGKGQRALIVSPPKAGKTTIIQDIANAITRNNPECHLMVVLVDERPEEVTDMQRS
VKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASG
RILSGGVDSTALYPPKRFLGAARNIEDGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAE
LKLDRKIAERRVFPAVDVNPSGTRKDELLLGPDEFAIVHKLRRVLSGLDSHQAIDLLMSQ
LRKTKTNYEFLVQVSKTAPGGADAD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagggcgatctgatcgccgcgatccgggagcaccaggccggtggttccggcaat
ggcggcggggcggccaaggcgggttcggtcaagtccgaggcgccggccccaagcgccgcg
cccaaggaggagggcccgaaggtggaaccggctcaggctgaagcgcccaagagcgaggcg
cccaagagtgaggcgcccaggcaggacgccaagtccggtgaccagggcgacggcggcggc
cagtccggcgagccgcgccggcgcgagcgccgcggggcgtcccgcgatgccggctcgccg
accggccagggcggtggtcaggaatcccgcggtgaccaggaccagaagtccgaccgcggt
gacggtggccagcagcgcgccaactccggcggcggcaacaccggcggcggcaattccggc
ggcggcaacgccgacgacgacgacgcccgcggcggccggcgcggccgtcgcttccgggac
cgtcggcgtcgcgagcgcggcggcggcgagggcggcgacaccgaactgcgcgaggacgac
gtcgtgcagccggttgccggcatcctcgacgtgctggacaactacgcgttcgtccgcacc
tcgggctacctggccgggcccaacgacgtctacgtctcgatgaacatggtccgcaagaac
ggcctgcgccgcggtgatgccgtcaccggcgcggtccgggtaccccgcgagggcgagggc
ggcggaggcgacaagaatcagcggcagaagttcaacccgctggtccggctcgactcggtc
aacggcggtccggtcgaggcggcccgcaatcgtccggagttcggcaagctgacgccgctg
tatccgaaccagcggctgcgcctggagaccaccccggacaagatcagcacccgggtcatc
gacctgatcatgccgatcggcaagggccagcgcgccctgatcgtgtcgccgcccaaggcc
ggtaagaccacgatcatccaggacatcgccaacgcgatcacccgcaacaaccccgagtgc
cacctgatggtcgtgctggtcgacgagcgacccgaagaggtcaccgacatgcagcgttcg
gtcaagggtgaggtcatcgcctcgaccttcgaccggccgccgtcagaccacacccaggcc
gccgagctggccatcgagcgggccaagcgcctggtcgagcagggcaaggacgtggtggtg
ctgctggactccatcacccggctgggccgcgcctacaacaacgcctccccggcgtcgggc
cgcatcctgtccggtggtgtggattccaccgcgctgtacccgcccaagcggttcctcggc
gcggcccgcaacatcgaggacggcggctcgctgaccatcatcgccaccgcgatggtcgag
accggctccaccggtgacaccgtgatcttcgaggagttcaagggcaccggcaacgccgag
ctcaagctggaccgcaagatcgccgagcgtcgggtgttcccggccgtggacgtcaacccg
tcgggcacccgcaaggacgagctgctgctcggccccgacgagttcgccattgtgcacaag
ctgcgccgggtgctgtccgggctggattcgcatcaggccatcgacctgctgatgagccag
ctgcgcaagaccaagaccaactacgagttcctggtccaggtgtccaagaccgcccccggc
ggcgccgacgccgactga
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