Massilia forsythiae: HH212_02535
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Entry
HH212_02535 CDS
T08391
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mfy
Massilia forsythiae
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfy03016
]
HH212_02535 (truB)
Enzymes [BR:
mfy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HH212_02535 (truB)
Transfer RNA biogenesis [BR:
mfy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH212_02535 (truB)
Prokaryotic type
HH212_02535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QJD99050
UniProt:
A0A7Z2ZR33
LinkDB
All DBs
Position
complement(570923..571849)
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AA seq
308 aa
AA seq
DB search
MNARPPKKPRDLVDGVLLIDKPVGLSSNDALIKAKRVLNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYLAEVRLGVTTTTGDTEGEAVETRPVDGVTLERIEAALASLRG
PILQVPPMYSALKRDGKALYEYAREGIVLEREARPVTIHALEMLGYEAPMLTIRVTCSKG
TYVRVLGEDIGKFLGCGAHLNALRRVQVGALTVAGMVTLEDLQAHADPLALLAPVDALLS
SFPAVELTAELAKRFLNGQRLALNREPVTLPEQQGRVRVYFGGKLLGSAILQEYGVLAPE
RLIARPQD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcgtcccccgaaaaagccgcgcgacctggtcgacggcgtgctgctgatcgac
aagccggtcggcctgtcctcgaacgatgcgctgatcaaggccaagcgcgtgctcaacgcc
aaaaaggccggccacaccggcaccctggatccgttcgccaccggcctgctgccgttgtgc
ttcggcgaggccaccaagttctcgcaggacctgctggaagcggacaagacctacctggcc
gaagtgcgcctgggcgtgaccaccaccaccggcgacaccgagggcgaagcggtcgagacg
cgtccggtcgacggcgtcacgctcgagcgcatcgaggccgcgctcgccagcctgcgcggc
ccgatcctgcaggtgccgccgatgtactcggccctgaagcgcgacggcaaggcgctgtac
gaatacgcgcgcgaaggcatcgtgctggagcgcgaggcgcgcccggtgaccatccacgcg
ctcgagatgctgggctacgaagcgccgatgctgaccatccgcgtcacctgcagcaagggc
acctacgtgcgcgtgctgggcgaggacatcggcaaattcctgggctgcggcgcgcacctg
aacgcgctgcgccgggtgcaggtcggcgccttgacggtggccggcatggtgacgctggaa
gacttgcaggcgcacgccgatccgctggcgctgctggcgccggtcgatgcgctgctgtcg
agctttccggcggtcgagctgacggcggaactcgccaagcgcttcctcaacggccagcgc
ctggccctgaaccgcgagccggtgacgctgcccgagcagcagggcagggtgcgcgtgtac
ttcgggggcaagctcctgggcagcgcgatcctgcaggaatacggcgtgctggcgcccgag
cgcctgatcgcgcggccgcaggattga
DBGET
integrated database retrieval system
