Massilia forsythiae: HH212_04080
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Entry
HH212_04080 CDS
T08391
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mfy
Massilia forsythiae
Pathway
mfy03030
DNA replication
mfy03410
Base excision repair
mfy03420
Nucleotide excision repair
mfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH212_04080 (polA)
03410 Base excision repair
HH212_04080 (polA)
03420 Nucleotide excision repair
HH212_04080 (polA)
03440 Homologous recombination
HH212_04080 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfy03032
]
HH212_04080 (polA)
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_04080 (polA)
Enzymes [BR:
mfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH212_04080 (polA)
DNA replication proteins [BR:
mfy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HH212_04080 (polA)
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HH212_04080 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH212_04080 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QJD99313
UniProt:
A0A7Z2VUB7
LinkDB
All DBs
Position
complement(948757..951543)
Genome browser
AA seq
928 aa
AA seq
DB search
MDNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRSDFPAAYIACVFDA
KGKTFRDELYPEYKATRASMPEDLGKQIEPIHEVVRYLGWPILMVEGVEADDVIGTLAAQ
ATARGMNTVVSTGDKDLAQLVNDKVMLINTMSNEKLDEAGVLAKFGVAPDRIVDYLTLIG
DTVDNVPGVAKCGPKTAVKWLGLHGSLDGVVENAHTIGGAVGENLRAALDWLPRGRELIT
VKTDCDLVNHLVSIEESLVGRPEDKDALRAFFERYGFKTMLRELGPLTGNGRADKYGRPG
EPAPNGSGALALNSPEGAGHQPDMPIIKGEYETVTTDEQLERWLALIDGAALTSVDTETT
SLDPMTAQMVGISLSVEAGKGAYIPLAHRYAGVPEQLNREEVLARMQPWLESPDKPKLGQ
NLKYDSHIFANHGIALRGIVHDTLLQSYVFESHKPHDMDTMAMRHLGYTTIPFVDVCGKG
ANMICFDQVELGRATEYAAEDSDITLRLHQNMIGHVESNKGLDYIYRKIELPTSIVLQKI
ERNGVLIDADKLAAQSSELAKRIMALEQQAYDMAGGPFNLGSPKQIGEIFFGKLQLPVIK
KTATGAPSTDEEVLQKLAEDYPLPKVLLEHRGLSKLKSTYTDKLPKMVNPQTGRVHTHYA
QAVAITGRLASSDPNLQNIPVRTGEGRRIREAFVAPPGSVIVSADYSQIELRIMAHISGD
EAMLRAFASGEDIHRATAAEVFGVAPQDVDSEQRRYAKVINFGLIYGMSSFGLAQNLGIE
RGAAANYIERYFARFAGVKQYMDETRLLAKQRGYVETVFGRRLWLPEINSPNGPRRAGAE
RAAINAPMQGTAADLIKLAMIAVQDWIEREQLGTRMVMQVHDELVLEVPQAELELVKQKL
PELMAGVAELKVPLVAETGVGSNWEEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccctccttctcgtcgacggttccagctacctgtatcgcgccttccacgcc
ttgcccgacctgcgcagccctgacggctacccgaccggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgctcggatttcccggccgcctacatcgcctgcgtgttcgacgcc
aagggcaagaccttccgcgacgagctgtaccccgagtacaaggccacgcgcgcatcgatg
ccggaagacctgggcaagcagatcgagccgatccacgaagtggtgcgctatctcggctgg
ccgatcctgatggtggaaggcgtcgaggccgacgacgtgatcggcacgctggcggcgcag
gccaccgcgcgcggcatgaacaccgtggtctccaccggagacaaggacctggcccagctg
gtcaacgacaaggtcatgctgatcaacacgatgagcaacgagaagctcgacgaggccggc
gtgctggccaagttcggcgtggcgccggaccgcatcgtcgattacctgaccctgatcggc
gacaccgtcgacaacgtgcccggcgtggccaagtgcggtcccaagacggcggtcaagtgg
ctcgggctgcacggctcgctggacggcgtggtcgagaatgcgcacaccatcggcggcgca
gtgggcgagaacctgcgcgcggcgctggactggctgccgcgcgggcgcgaactgatcacc
gtgaaaaccgactgcgatctggtcaaccacctggtgtcgatcgaggaaagcctggtcggc
cgtcccgaggacaaggatgcgctgcgcgccttcttcgagcgctacggcttcaagaccatg
ctgcgcgaactcggtccgctcaccggcaacggccgcgccgacaagtacggccgcccgggc
gagccggcaccgaatggcagcggcgcgctggcgctgaattcgccggaaggcgccggccac
cagccggacatgccgatcatcaagggcgaatacgagaccgtcaccaccgatgagcagctg
gagcgctggctggcgctgatcgacggcgcggcgctgacctcggtcgacaccgagaccacc
tcgctcgatccgatgacggcgcaaatggtcggcatctcgctgtcggtggaggcgggcaag
ggcgcctacatcccgctggcgcaccgctacgccggcgtgcccgagcagttgaatcgcgaa
gaagtcctggcgcgcatgcagccctggctggaaagcccggacaaaccgaaactcggccag
aacctgaagtacgacagccacatcttcgccaaccacggcatcgcgttgcgcggcatcgtg
cacgacacgctgctgcaatcctacgtgttcgagtcgcacaagccgcacgacatggacacc
atggcgatgcgccacctcggctacaccaccatcccgttcgtggacgtgtgcggcaagggc
gccaacatgatctgcttcgaccaggtcgaactgggccgcgccaccgaatacgcggccgag
gactcggacatcacgctgcgcctgcaccagaacatgatcggccacgtggaaagcaacaag
ggcctggactacatctaccgcaagatcgagctgccgacctcgatcgtgctgcagaagatc
gagcgcaacggcgtgctgatcgacgccgacaagctggcggcgcaatccagcgagctggcc
aagcgcatcatggcgctggagcagcaggcctacgacatggcgggcggcccgttcaacctc
ggttcgcccaagcagatcggcgagatcttcttcggcaagctgcagctgccggtcatcaag
aagaccgccaccggcgcgccctcgaccgacgaggaagtgctgcagaagctggccgaggat
tatccgctgccgaaggtgctgctggagcaccgcgggctgtcgaagctgaagtcgacctac
accgataaactgccgaagatggtgaacccgcaaaccgggcgcgtgcacacccactacgcg
caggcagtggcgatcaccgggcgcctggcgtcgagcgatccgaacctgcagaacatcccg
gtgcgtaccggagaaggccggcgcatccgcgaagccttcgtggcgccgccgggcagcgtg
atcgtgtcggccgactattcgcagatcgagctgcgcatcatggcgcacatttcgggcgac
gaagcgatgctgcgcgcgttcgcctcgggcgaggacatccaccgcgccaccgccgccgaa
gtgttcggcgtggcgccgcaggatgtcgacagcgagcagcgccgttatgcgaaagtgatc
aacttcggcctgatctacggcatgagctcgttcggcctggcgcagaacctgggcatcgag
cgcggcgccgccgccaactacatcgagcgctatttcgcccgcttcgccggcgtcaagcag
tacatggacgagaccaggttgctggccaagcagcgcggctacgtcgagaccgtgttcggc
cggcgcctgtggctgcccgagatcaactcgccgaacggcccgcgccgcgccggcgccgaa
cgcgcggcgatcaacgcgccgatgcagggcacggcggccgacctgatcaagctggcgatg
atcgcggtgcaggactggatcgagcgcgaacagctgggcacgcgcatggtgatgcaggtg
cacgacgagctggtgctggaagtgccgcaagcggaactggaactggtcaagcagaaactg
ccggagctgatggccggcgtggccgagctgaaggtgccgctggtggccgagaccggggta
ggcagcaattgggaggaagcgcactag
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