Massilia forsythiae: HH212_05890 Help Entry HH212_05890       CDS       T08391                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism mfy  Massilia forsythiae Pathway mfy02020   Two-component system mfy02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:mfy00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HH212_05890  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HH212_05890  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mfy03021]     HH212_05890 Transcription machinery [BR:mfy03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HH212_05890 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_23 Xre-like-HTH HTH_Crp_2 Motif Other DBs NCBI-ProteinID:  QJD99612 UniProt:  A0A7Z2VV09 LinkDB All DBs Position complement(1376174..1377673) Genome browser AA seq 499 aa AA seqDB search MKQSLQLKTSQHLALTPQLQQSIRLLQLSTLELHQEIEQVLSDNPLLERLDDPLDRSVRL LADGAINNNAGTSTTPSNEAPNAEANGQEGGAAAENGEGGEASGDEGGGAAEGADADWGE TGRASGNGDDEDGRPQLEASPVSLREHLMEQLRLTCFAARDCALVELVIDALDDNGYLEE PLDDIHARLPQELEVEFDELRTALALVQSMDPPGVGARSAAECLALQIRRMHGVPLVTRR MALVIVERYLSWFAQREFNKLKKALDCDDEDLREAQAVIRQCNPHPGAAFAADVSDYVVP DVIVRRAKDGWSVQLNPEVMPRLRVNSVYASLLKQGKSESQLSAQLQEAKWLIKNMRQRF DTILRVAQAIVDRQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMF ELKYFFGSHVATEAGGEASSTAIRALIVQLTGAEDPKNPLSDSKIADMLGEQGMVIARRT VAKYREALKIPPVSLRKSL NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtcgctgcaactcaagacctcgcaacacctggcactgaccccgcagctgcag cagtcgatccggctgctgcagctgtccacgctcgaactgcaccaggaaatcgaacaggtg ctgagcgataacccgctgctggaacgcctggacgatccgctcgaccgctcggtgcgcctg ctggccgacggcgccatcaacaacaacgccggcacgtcgacgaccccgtcgaacgaggcg cccaacgcggaagccaacggccaggaaggcggcgccgctgccgagaacggcgaaggcggc gaagccagtggcgacgagggcggcggcgcagccgaaggcgcggatgccgactggggagag acgggacgcgccagcggcaatggcgacgacgaggacggccgcccgcagctggaagccagt ccggtctcgctgcgcgagcatttgatggagcagttgcgcctgacctgcttcgccgcgcgc gattgcgcgctggtggaactggtgatcgacgcgctcgacgacaacggttacctggaagag ccgttggacgacatccacgcgcgcctgccgcaagagctggaagtcgagttcgacgagctg cgcaccgcgctggcgctggtgcagagcatggacccgcccggcgtcggggcgcgcagcgcg gccgagtgcctggcgctgcagatccggcgcatgcacggcgtgccgctggtgacgcggcgc atggccctggtcatcgtcgagcgctacctgagctggttcgcgcagcgcgaattcaacaag ctgaaaaaggcgctcgactgcgacgacgaagacctgcgcgaggcgcaggcggtgatccgc cagtgcaatccgcatccgggtgcggcattcgcagcggacgtgtccgactacgtggtgccg gacgtgatcgtgcgccgcgccaaggacggctggagcgtgcaattgaatccggaagtgatg ccgcgcctgcgcgtgaacagcgtgtacgcgtcgctgctgaaacagggcaagagcgagagc caattgagcgcgcaattgcaggaagcgaagtggctgatcaagaacatgcgccagcgtttc gacacgatcctgcgcgtggcgcaagccatcgtcgatcgccagcgcaactttttctcccat ggcgcggttgccatgcgtccccttgttttacgcgagatagctgatacactaggcctacac gagagcacaatttctcgggttacaactcaaaaatacatgctgacgccgcatggcatgttc gagttgaagtacttttttgggagccacgttgcgaccgaggcgggcggtgaagcgtcctcg acggcaatccgggctctgatcgtgcaacttacaggagcggaagaccccaagaatccctta tcggatagcaagattgcggacatgctgggggagcagggcatggtgattgcgcgccgcacg gtcgccaagtaccgtgaagccttgaagattccacccgtcagcctccgcaaatccttgtag

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