Massilia forsythiae: HH212_10445
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Entry
HH212_10445 CDS
T08391
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mfy
Massilia forsythiae
Pathway
mfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HH212_10445 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfy03019
]
HH212_10445 (recQ)
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_10445 (recQ)
Enzymes [BR:
mfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH212_10445 (recQ)
Messenger RNA biogenesis [BR:
mfy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HH212_10445 (recQ)
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HH212_10445 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QJE00391
UniProt:
A0A7Z2VVS8
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All DBs
Position
complement(2417915..2419765)
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AA seq
616 aa
AA seq
DB search
MTSEIQAGETRASELQERALHVLETVFGYPAFRGQQADIVEHVASGGDALVLMPTGGGKS
LCYQIPALLRDGVGVVISPLIALMQDQVDALAEVGVRAAFLNSTQTFEETLRIERLVRTG
EIDLVYVAPERLMTQRCLDLFESAHISLFAIDEAHCVSQWGHDFRPEYIRLSILHERFPH
VPRIALTATADQLTRAEIAQRLQLEEARQFVSSFDRPNIRYSIVEKGNGRKQLLDFISSE
HPGDSGIVYCLSRKKVEETAEFLNEHGIRSLPYHAGMDHALRASNQSRFLREENIVMVAT
IAFGMGIDKPDVRFVCHLDLPKSLEGYYQETGRAGRDGAPSNAWMAYGLQDVVLQRRMID
ESEADENFKRVLSSKLDAMLGLCETLSCRRMRLLEYFGERSGPCGNCDTCLMPPVSFDAT
VPVQKLLSAIYRVDQRFAAGHVIDVLRGAQTERITQWHHDRLTVYGVGADRGEQEWRAIV
RQAISLGLVTVDHESYSSLKLTDAARPVLKGEQKVQLRQYQKPVKQKRADRPAKSYVEMD
LSKSEQAIFEKLRWWRMETARAHNVPAYVIFVDATLREIAKAKPGSLEELRGVSGVGEKK
LASYGEEIVALIADMM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgagatccaagcgggcgaaacccgggcgagcgaactccaggagcgcgcgctg
cacgtattggagacggtattcggctaccccgccttccgcgggcagcaggcggatatcgtc
gagcacgtcgcgtccggcggcgacgcgctggtgctgatgcccaccggcggcggcaagtcg
ctgtgctaccagatcccggcgctgctgcgcgacggtgtcggcgtggtcatttctccgctg
atcgcgctgatgcaggaccaggtcgacgcgctggccgaggtcggcgtgcgcgccgccttc
ttgaattcgacccagaccttcgaggaaaccctgcgcatcgagcgcctggtgcgcaccggc
gaaatcgacctggtgtacgtggcgcccgaacgcctgatgacgcagcgctgcctggacctg
ttcgagtcggcgcacatttcgctgttcgcgatcgacgaggcgcactgcgtgtcgcaatgg
ggccacgacttccggccggaatacatccgcctgtcgatcctgcacgagcgcttcccgcac
gtgccgcgcatcgccctcaccgccaccgccgaccagctcacgcgcgccgagatcgcccag
cgcctgcagctggaagaagcgcgccagttcgtctcgtccttcgaccgccccaacatccgc
tactcgatcgtcgaaaagggcaatggccgcaagcagttgctggattttatttcgagcgag
catccgggcgactcgggcatcgtctactgcctgtcgcgcaagaaagtcgaagagacagcc
gaattcctcaacgagcacggcatccgatcgctgccctatcacgccggcatggaccacgcg
ctgcgcgcgtcgaaccagtcgcgtttcctgcgcgaggaaaacatcgtgatggtggcgacc
atcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtctgccacctcgacctg
ccgaaatcgctggaaggctattaccaggaaaccggccgcgccggccgcgacggcgcaccg
tcgaacgcctggatggcctacggcttgcaggacgtggtgctgcagcgccggatgatcgac
gagtcggaggcggacgagaatttcaagcgcgtgctgtcctccaagctggacgccatgctc
ggcctgtgcgaaaccctcagctgccgccgcatgcgcctgctggaatacttcggcgagcgc
tccggcccgtgcggcaattgcgacacctgcctgatgccgccggtatcgttcgacgccacg
gtgcccgtgcaaaagctgctgtcggcgatctaccgcgtcgaccagcgctttgccgccggc
cacgtgatcgacgtgctgcgcggcgcccagacggaacgcatcacccaatggcaccacgac
cgcctgacggtgtacggcgtcggcgccgaccgcggcgaacaggaatggcgcgccatcgtg
cgccaggcgatttccctcggcctggtcacggtcgaccacgagtcgtacagttccctgaaa
ctgaccgatgcggcgcgcccggtgctcaagggcgagcaaaaggtgcagttgcgccagtac
cagaaaccggtcaagcagaagcgcgcggaccggccggccaagagctacgtcgagatggac
ctgtcgaagtcggaacaggcgatcttcgagaaactgcgctggtggcgcatggaaaccgcg
cgcgcccacaacgtgccggcctacgtcatcttcgtcgacgcgacgctgcgcgagatcgcc
aaggccaagccgggttcgctggaagaactgcgcggcgtgtcgggcgtgggcgagaagaag
ctggcctcgtatggcgaggaaatcgtcgcgctgatcgccgacatgatgtga
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