Massilia forsythiae: HH212_16730
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Entry
HH212_16730 CDS
T08391
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
mfy
Massilia forsythiae
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfy03009
]
HH212_16730 (dbpA)
Enzymes [BR:
mfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HH212_16730 (dbpA)
Ribosome biogenesis [BR:
mfy03009
]
Prokaryotic type
rRNA helicases
HH212_16730 (dbpA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QJE01475
UniProt:
A0A7Z2VZ01
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All DBs
Position
complement(3888478..3889887)
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AA seq
469 aa
AA seq
DB search
MQDTAFSSLQLEERFLANLSQLGYRQMTPVQASALPAALAGRDLIVQAKTGSGKTAAFGI
GMLLKLNPTLFAVQGMVLCPTRELADQVAGELRRLARGIGNVKVVTLTGGVPMRPQIASL
EFGAHIVVGTPGRVRDHLQRRTLDLARLHTLVLDEADRMTDMGFYDEIAGIVRDCPSYRQ
TLLFSATYPDDIREATVHFLTDPQEIAVETQHAPAQIEQRFYEIGFDGRDAAVARLLRHY
RPASAIAFCNTKARCREVADYLQQQGFSALALYGELEQRDRDETLVLFANRSCSVLVATD
VAARGIDIAGLEAVINVDVSKDPEVHVHRVGRTGRAGESGLALSLCAPNEKRFVRAIEDM
QGAPASWHPLDELDGDAGVVEPAPMVTLCFAGGKKDKLRPGDLLGALTNDGGLTKEQVGK
IHILEFASYVALARDVAEQAFARLSAGNPLGADYGSVKGRNFRMRFITP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataccgccttctcctcgctccagctcgaggagcgcttcctcgcgaacctgtcc
cagctcggctaccgccagatgacgccggtgcaggcatccgccctgcccgcggcgctggcc
gggcgcgacctgatcgtccaggccaagaccggcagcggcaagaccgccgccttcggcatc
ggcatgctgctcaagctgaacccgacgctgttcgcagtgcagggcatggtgctgtgcccg
acgcgcgaactggccgaccaggtcgccggcgaactgcgccgcctggcgcgcggcatcggc
aacgtcaaggtggtcacgctcaccggcggtgtgccgatgcgcccgcagatcgccagcctc
gaattcggcgcccacatcgtggtcggcaccccgggccgggtgcgcgaccacctgcaacgc
cgcaccctcgacctggcgcgcctgcacacgctggtgctggacgaggccgaccgcatgacc
gacatgggtttctacgacgagatcgccggcatcgtgcgcgattgccccagctatcgccag
accctgctgttctcggccacctacccggacgacatccgcgaagccaccgtccacttcctc
accgatccgcaggagatcgcggtcgagacgcaacatgcgccggcccagatcgaacagcgc
ttctacgagatcggcttcgacggccgcgacgccgccgtggcgcgcctgctgcgccactac
cgcccggcgtcggcgatcgccttctgcaacaccaaggcgcgctgccgcgaagtggccgat
tacctgcagcagcagggcttttcggctctggcgctgtacggcgaactggagcagcgcgac
cgcgacgagaccctggtgctgttcgccaaccgcagctgttcggtgctggtcgccaccgac
gtggcggcgcgcggcatcgacatcgccggcctggaagcggtgatcaacgtcgacgtctcc
aaggacccggaagtgcacgtgcaccgggtcgggcgcaccggccgcgcgggcgagagcggc
ctggcgctgtcgctgtgcgcgcccaacgaaaagcgcttcgtgcgcgccatcgaggacatg
cagggcgcgcccgcgtcctggcatccgctggacgagctcgatggcgacgccggcgtggtg
gaaccggcgccgatggtcacgctgtgcttcgccggcggcaagaaggacaagctgcgcccg
ggcgacctgctgggcgcgctgaccaacgacggcggcctgaccaaggaacaggtcggcaag
atccacatcctcgaattcgccagctacgtggcgctggcgcgcgacgtggccgagcaggcc
ttcgcgcgcctgagcgccggcaatccgctgggtgcggactacggcagcgtcaagggacgc
aatttccggatgcgtttcattacgccctga
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