Massilia forsythiae: HH212_17870
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Entry
HH212_17870 CDS
T08391
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfy
Massilia forsythiae
Pathway
mfy03420
Nucleotide excision repair
mfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH212_17870
03430 Mismatch repair
HH212_17870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_17870
Enzymes [BR:
mfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH212_17870
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH212_17870
MMR (mismatch excision repair)
Other MMR factors
HH212_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
NACHT
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QJE01663
UniProt:
A0A7Z2ZTM1
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All DBs
Position
4202751..4204871
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AA seq
706 aa
AA seq
DB search
MPAAPAPAHAPAASTARDPFAELNPQQRAAVEHDIGAAAPRPLLVVAGAGSGKTSTLAHR
VARLIQSGADPQRILLLTFSRRAANEMGQRAAGVLQRVLGLSGRHGSSQPMAGLPWAGTF
HAIGARLLREYAGRIGLEPSFTIHDRGDAEDLMGMVRHEIGLGAAGGQKRFPLKGTCLAI
YSRVVNSREPLERVLQSTFPWCSEWEAQLKRLFGAYVDAKQEQNVLDYDDLLLFWAEMAA
DPELGPELGALFDHVLVDEYQDTNRLQAAIVRGMKPDGRGVMAVGDDAQSIYSFRGATVR
NILDFPQQFSRPACTVTLERNYRSTQPILDASNAVIAAALERHAKTLWTDRVSSARPQLI
LIPDEAEQARWVCNRVLALREEGVKLIQQAVLFRAASHSAALELELVRRNVPFVKFGGLK
FLEAAHVKDLLALLRFAQNPSGRLAGFRAAQLVPGIGQATAARLLEAVGQAADACAAVDA
FAPPPRAQTDWDAFAALFRTLRAPGLRWPLDAELARDWYLPHLERLYDDAPVRAADLDQL
VQLAGGHGSRESFLTELTLDPPDATSDRAGPPLLDEDYLILSTIHSAKGQEWKSVTVLNA
VDGCIPSDMSTGSADDIEEERRLLYVAMTRAREHLQLVLPHRFFVRQQAQMGDRHVYAQR
TRFISPAMLKHFDECLWQDADTPHSRKPMPDSVRMLVRERARNAWK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgctcccgcacctgcccacgcacccgccgcctcgacggcgcgcgatccgttc
gccgaactcaatccccagcagcgcgccgccgtcgagcacgacatcggcgccgccgcgccg
cgcccgctgctggtggtggccggcgccggctcgggcaagaccagcaccctggcgcaccgc
gtggcgcgcctgatccagtccggcgccgacccgcagcgcatcctgctgctgaccttttcg
cggcgcgccgccaacgagatggggcagcgcgccgccggcgtgctgcagcgcgtgctgggc
ctgtccggccggcacgggtcgagccagccgatggccggcctgccatgggccggcactttc
cacgccatcggcgcacgcctgctgcgcgagtatgccgggcgcatcggcctggaaccctcg
ttcaccatccacgaccgcggcgacgccgaggacctgatgggcatggtgcgccacgagatc
ggactgggcgccgccggcggccagaagcgctttccgctgaagggcacctgcctggcgatc
tattcgcgcgtggtgaacagccgcgaaccgctggagcgggtgttgcaatcgacctttccc
tggtgcagcgaatgggaagcgcaactcaagcgcctgttcggcgcctacgtcgacgccaag
caggaacagaacgtgctcgactacgacgacctgctgctgttctgggccgagatggcggcc
gaccccgagctcggccccgaactgggcgcgctgttcgaccacgtgctggtcgacgaatac
caggacaccaaccgcctgcaggccgccatcgtccggggcatgaagccggacggccgcggc
gtgatggcggtgggcgacgatgcccagtcgatctattcgttccgcggcgccacggtgcgc
aacatcctggattttccgcagcagttctcgcgcccggcctgcaccgtcacgctggagcgc
aactaccgctcgacccagccgatcctggacgcctccaacgccgtgatcgcggcggcgctg
gagcgccatgccaagacactgtggaccgaccgcgtctccagcgccaggccgcaattgatc
ctgattccggacgaggccgagcaggcgcgctgggtctgcaaccgcgtgctggctttgcgc
gaggaaggcgtcaagctgatccagcaggcggtgctgttccgcgccgccagccacagcgcg
gcgctggagctggagctggtacgccgcaacgtgccgttcgtgaagttcggcggcctgaaa
ttcctggaagcggcgcacgtcaaggacttgctggcgctgctgcgcttcgcccagaatccg
agcggacgcctggccgggttccgcgcggcccagctggtgccgggcatcggccaggccacg
gcggcgcgcctgctggaagcggtggggcaggcggccgatgcctgcgccgcggtggacgca
ttcgcgccgccgccgcgcgcacagaccgactgggacgcgttcgccgcgctgttccgcacc
ctgcgcgcgcccggcctgcgctggccgctggacgccgagctggccagggactggtacctg
ccgcacctggagcggctgtacgacgacgccccggtgcgcgccgccgacctcgaccagctg
gtgcagctggccggcggccatggctcgcgcgaatccttcctcaccgaactgacgctggat
ccgccggacgccaccagcgaccgcgccggaccgccgctgctggacgaggattacctgatc
ctgtccaccatccactcggccaagggacaggaatggaagtcggtgacggtgctgaacgcg
gtcgacggctgcattccgtccgacatgtcgaccggcagcgccgacgacatcgaggaagag
cggcgcctgttgtacgtggccatgacgcgcgccagggaacacctgcagctggtgctgccg
caccgcttcttcgtccgccagcaggcgcagatgggcgaccgccacgtctacgcccagcgc
acccgcttcatctctcccgccatgctcaagcacttcgatgagtgcctgtggcaggacgcg
gacacgccgcacagccgcaagccgatgccggacagcgtgcgcatgctggtgcgcgagcgc
gcgcgcaatgcctggaaatag
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