Massilia forsythiae: HH212_17925
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Entry
HH212_17925 CDS
T08391
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mfy
Massilia forsythiae
Pathway
mfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HH212_17925 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_17925 (recC)
Enzymes [BR:
mfy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HH212_17925 (recC)
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH212_17925 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJE01673
UniProt:
A0A7Z2VYA3
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All DBs
Position
4221778..4225239
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AA seq
1153 aa
AA seq
DB search
MPAPITPGLLILHGNQMELLRAAVFDWLRDNPLGPLEEELILVQSNGVAEWLKIALAEDV
GVCAATRVALPARFLWQAYRGMLGPERVPRRSPFDKDALVWRLMRLLPEAIEKEKFAPLR
QFLADGDPERRLQLAERLADLYDQYQVYRADWLSDWADGRDQLRRPGGDAVELAHDQCWQ
AQLWREIHASLPPERRWSGRATIHQQFMAAAEDGKPPAGKLPRRVVLFGMSTLPYQTIQA
MAGLSRYTQVLLAVPNPCQFYWGDIIEGRELLRAAYQRHQPRNGASLADIPPEQMHAHCH
PLLASWGRQGRDFVRMLDEFDGDHGARFGSLRVDLFSDDAGDCLLAQAQAAIRDLLPLDE
HPKAPPAASDRSIEFHIAHSAQREVEVLHDQLLSWFAEERDEPLRPRDVVVMMPDIDTFS
AAIHAVFDQHKRSDPRYIPFEIGDVKDRSVNPLLVALEWLLRLPQQRCRQSEVRDLLDVP
ALAARFGVGEDDLPILGHWIEGASVRWGLDRQHRAGLGLGSAGEQNSWLFGLRRMLLGYA
TGAGPSFGDIEPYAEVGGLDAALAGSLAELVEALLAWREQLDEHLRPLEWGKRVRAMMAR
FFRAAGEEDRLVLNQLDEALQCWLEICANASFDEPVPLAVLREAWLRELDQPALTHQFVS
GGVTFCTLMPMRAVPFRVVCLMGMNDGDFPRRAQHADFDLLAMPGMGRPGDRSRRDDDRY
LMLEALLAARDKFYVSWVGRNVRDNTEQPASVLVSQLRDYLASGWNMDAQALTTVHALQP
FSRRYFERGGLLTYAGEWRAAHGAAAGAGDGGDAPASAVLEPYELEPDYRLKLGELASFL
RQPARYFFRRRLGVHFDSLEVVGEDEEPFSLDALERYFLEDTLLDDSGLPEPQEDVRRVL
AARAERLAREGVLPIGLIGRQWQQQLVDELVPVRTAWLALGARYPHEAPKLALALELACA
DGSTLPLDDWIDRLRSDGARSVWLMQVSSKVLDRKGAPRGDKLIGAWLRQLAAGAMGHAV
TGYLVGRDATVEMAPLDPDAARAALSRLAALWRANLDRPLEVACKTALAHLQGGDARETY
DGGFELDGEVIDPCLARLWPEFALLAASGGWPGVAQELYGPLADWLAGGVRVLPFGADAD
ADADAGAHAGAAA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgccagccccgatcacccccggcctcctcatcctgcacggcaaccagatggaattgctg
cgcgccgccgttttcgactggctgcgcgacaatccgctcggcccgctcgaggaagagctg
atcctggtgcagtccaacggcgtggccgagtggctcaagatcgcgctggcggaagacgtc
ggcgtgtgcgcggccacgcgcgtggcgctgccggcgcgcttcctgtggcaggcctaccgc
ggcatgctggggccggagcgggtaccgcgccgctcgcccttcgacaaggatgcgctggtg
tggcgcctgatgcgcctgctgcccgaggcgatcgaaaaggagaagttcgcgccgctgcgc
cagttcctggcggacggcgacccggaacgccgcctgcagctggccgagcgcctggccgac
ctgtacgaccagtaccaggtgtaccgcgccgactggctgagcgactgggccgacgggcgc
gatcagttgcgccgtcccggcggcgacgccgtcgagctggcgcacgaccagtgctggcag
gcccagctctggcgcgagatccacgccagcctgccgcccgagcggcgctggtcggggcgc
gccaccatccaccagcaattcatggcggcggccgaggacggcaaaccgccggccggcaag
ctgccgcgccgggtggtgttgttcggcatgtcgacgctgccctaccagaccatccaggcc
atggccggcctgtcgcgctacacgcaggtactgctggcggtgccgaacccgtgccagttc
tactggggcgatatcatcgaagggcgcgaactgctgcgcgccgcctatcaacgccaccag
ccgcgcaacggcgccagcctggccgacattccgcccgagcagatgcacgcgcactgccat
ccgctgctggccagctgggggcggcaagggcgcgacttcgtgcgcatgctggacgaattc
gacggcgaccacggcgcccggttcggcagcctgcgcgtggacctgttctcggacgacgcg
ggcgattgcctgctggcccaggcccaggccgccatccgcgacctgctgccgctggacgag
catccaaaggccccgccggccgcgagcgaccgctcgatcgaattccacatcgctcacagc
gcccagcgcgaggtcgaggtgctgcacgaccagctgctgtcctggttcgcggaagaacgc
gacgaacccttgcgtccccgcgacgtggtggtcatgatgcccgacatcgacaccttctcg
gccgcgatccacgcggtgttcgaccagcacaagcgcagcgatccgcgttatatccccttc
gagatcggcgacgtcaaggaccgcagcgtgaacccgctgctggtggcgctggagtggctg
ttgcgcctgccgcagcagcgctgccgccagagcgaggtgcgcgacctgctcgacgtgccg
gcgctggcggcgcgcttcggcgtgggcgaggacgacctgccgatcctgggccactggatc
gagggcgccagcgtgcgctggggcctggaccggcagcaccgcgccggcctcgggctgggt
tccgccggcgagcagaattcctggctgttcggcctgcgccgcatgctgctcggctacgcc
accggcgccggtcccagcttcggcgacatcgagccgtacgccgaggtcggcgggctggac
gcggccctggccggctcgctggccgaactggtggaagcgctgctggcctggcgcgaacaa
ttggacgaacacctgcgtccgctggagtggggcaagcgcgtacgcgccatgatggcgcgc
ttcttccgcgccgccggcgaggaagaccgcctggtgctgaaccagctcgacgaagcgctg
caatgctggctggagatctgcgccaacgcatcgttcgacgagccggtgcccctggcggtg
ctgcgcgaagcctggctgcgcgaactcgaccagccggcgctgacccaccagttcgtctcc
ggcggcgtcaccttctgcacgctgatgccgatgcgcgccgtgccgttccgcgtggtgtgc
ctgatggggatgaacgacggcgatttcccgcgccgcgcccagcacgccgacttcgatctg
ctggccatgcccggcatgggccgccccggcgaccgctcgcgccgcgacgacgaccgctat
ctgatgctggaagcgctgctggcggcgcgcgacaagttctacgtcagctgggtcgggcgc
aacgtgcgcgacaacaccgaacagccggcctcggtgctggtgtcgcagctgcgcgactac
ctggcgtccggctggaacatggatgcgcaagcgctcaccaccgtgcacgcgctgcaaccg
ttctcgcgccgctacttcgagcgcggcgggctactcacctatgccggcgaatggcgcgcg
gcgcacggggcggcggcaggcgccggcgatggtggcgacgcgcctgcgtccgccgtactc
gaaccgtacgagctggaaccggactaccgcttgaaactgggcgagctggccagcttcctg
cgccagccggcgcgctacttcttccgccgccgcctgggcgtgcatttcgacagcctggaa
gtggtgggcgaggacgaggaaccgttctcgctggatgcgctcgaacgctacttcctggaa
gacacgctgctggacgacagcggcctgcccgagccgcaggaagacgtgcgccgcgtgctg
gcggcgcgcgccgagcgcctggcgcgcgaaggggtgctgccgatcggcctgatcgggcgc
cagtggcagcagcagctggtcgacgaactggtgccggtgcgcacggcctggctggcgctg
ggggcgcgctatccgcatgaggcgcccaagctggcgctcgcgctggagctggcgtgtgcg
gacgggtccacgctgccgctggacgactggatcgaccgcctgcgcagcgacggcgcgcgc
agcgtgtggctgatgcaggtctccagcaaggtgctcgaccgcaagggcgcgccgcgcggc
gacaagctgatcggggcctggctgcgccagctggccgccggcgccatggggcatgcggtc
accggctacctggtcgggcgcgacgccacggtcgagatggcgccgctcgacccggacgcg
gcgcgcgctgccctgtcgcgcctggcggcgctgtggcgggccaacctcgaccggcccctg
gaagtggcctgcaagaccgcgctggcgcacctgcagggcggcgatgcgcgcgagacctac
gacggcggcttcgagctggacggcgaagtgatcgacccctgcctggcgcgcctgtggccg
gaattcgcgctgctggcggcgtccggcggctggccgggcgtggcccaggaactgtacggt
ccgctggccgactggctggcgggcggggtgcgcgtgctgccgttcggtgccgacgccgac
gccgatgccgatgccggcgcgcacgcgggagcggcggcatga
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