Massilia forsythiae: HH212_17930
Help
Entry
HH212_17930 CDS
T08391
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mfy
Massilia forsythiae
Pathway
mfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HH212_17930 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_17930 (recB)
Enzymes [BR:
mfy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HH212_17930 (recB)
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HH212_17930 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
DUF4159
Motif
Other DBs
NCBI-ProteinID:
QJE01674
UniProt:
A0A7Z2ZTS5
LinkDB
All DBs
Position
4225236..4229159
Genome browser
AA seq
1307 aa
AA seq
DB search
MSNLEPLAFPLHGSRLIEASAGTGKTYTIAALYLRLVLGHGSKGADGSAAAGDDGQGGMG
MDAEFDPDFDLAFDAGFGDAEADFAARFDAGAGPDLDGAPAWSLDDAAGEPASHGAYGGA
QGGGEAEPSAYLRPLMPPEILVMTFTRAATRELSNRVRERLVQAAAYFRGEARSDDPYLA
ALADSYADEGGRALAAHRLVLAAETMDEAAIFTIDAWCQRMLREHAFDSGSLFDEELVSD
ERGLFEDAAHDYWRQHVYPLGGAALAALLSCFKDVEALKRAVRELVPRADGLDQEGDDAA
ESLGALIVRIERRRQGELARIKAGWAERADAMENWIAAERDRNPKCFHGSKMRADTLAKW
FDALRAWALDPQLHTPALTEAAWNRLAPDGIVDAFSKGFSTTVPACFDAMRDLRAALDAV
APLAHALLRHAAGQIARRVAELKRRNRQFGFADMLARLKEALEGPNGAALRQRILDQFPV
AMVDEFQDTSPDQYRIFDLLYRVADNDPARGLFLIGDPKQSIYGFRGADIHSYLAARRAT
AGRHYQLGTNYRSTAQLVRAVNRLFQYAEGEAGDPGQPGYAAGAFRFRKDGDNPLPFEAV
AAAGRRQQLVGVDGPFQALAVCSTGRDDLRTDDYRAFFAEHCAEHIVTLLNDARVGFGDP
GGGFQRLVPADIAILVRDRREAAAVRHALARRRVASVYLSDQDSVLDSEEAADMLRWLQA
VANPLDGALARAAFATATCALPLAALARLASDEQAWENRVEQLKNLHQAWQRQGVLAMLR
RFIHELGLPSQLLAAGGGERRLTNLLHLAELLQEASRELDGEQALIRWFAEQIDGMGEAG
DERVLRLESDAELVKVVTVHKSKGLEYPLVYLPFAVTARKTERRNRAFFEYVDDGGARRI
DLGLGDAALEAVDRARLEEDLRLLYVALTRARHFLWLGVAAVAAGRKGENRLHESALGYL
LTGGEAIPAASMGARWQRLRGDVDGIALHDLQPLDGFTVLARQDARPELLRAAPFEHAFE
RNWSIGSFTSLTRHTVAPPTRPQEENLMEEAEAGAVEPVRVEDAPWHRFPRGATPGNFLH
EQLEWMAQEGFDRIDDAEHGARLAQRIERAGWANRLDDALAWLRALATTPLPPLDAALAD
LAREGTLLPEMEFWFPSRSLDVGALDRLCRARLLGDVARPTLPERQLHGMLKGFTDLVFE
HRGRYWVLDYKSNALGPGDAAYTQAAMAAGMAGHRYDIQGAIYLLALHRLLRARLGAAYD
PATQLGGALFLFLRGIASPATHGCFLLAPDLELLDGLDGLLGDGERT
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctggaaccgctggcgtttccgctgcacggctcgcgcctgatcgaggccagc
gccggcaccggcaagacctacaccatcgccgcgctgtacctgcgcctggtgctggggcac
ggcagcaagggcgcggacggttccgccgcggcaggagacgacgggcagggcggcatgggc
atggacgccgaattcgatcccgacttcgacctggccttcgacgccggctttggcgatgcc
gaagcggatttcgccgcgcgcttcgacgccggcgccggcccggatctggacggcgccccc
gcctggtccctggacgatgcggcgggcgaacctgcaagccacggcgcgtacggtggcgcc
cagggcggcggcgaggccgagccgagcgcctacctgcgcccgctgatgccgcccgaaatc
ctggtgatgacctttacccgcgccgccacgcgagagctgtcgaaccgcgtgcgcgagcgt
ctggtgcaggcggcggcgtacttccgcggcgaggcccgcagcgacgatccctacctggcg
gcgctggccgacagctatgccgacgaaggcgggcgcgcgctggccgcgcaccgcctggtg
ctggccgccgagaccatggacgaagcggccatcttcaccatcgacgcctggtgccagcgc
atgctgcgcgagcatgccttcgatagcggcagcctgttcgacgaggaactggtcagcgac
gagcgcggcctgttcgaggatgccgcccacgattactggcgccagcacgtgtatccgctc
ggcggcgcggcgctggcggcgctgctgtcctgcttcaaggacgtcgaggcgctgaagcgc
gcggtgcgcgaactggtgccgcgcgccgacgggctggaccaggaaggcgatgacgccgcg
gagagcctgggcgcgctgatcgtgcgcattgaacgccggcgccagggcgaactggcgcgc
atcaaggccggctgggccgagcgcgccgacgccatggaaaactggatcgccgccgaacgc
gatcgcaatcccaagtgcttccacggcagcaagatgcgcgccgacaccctggccaagtgg
ttcgatgcgctgcgcgcctgggcgctcgatccgcaactgcacaccccggcgctgaccgag
gcggcctggaaccgcctggcgccggacggcatcgtggacgccttcagcaagggtttcagc
accacggtgccggcctgcttcgacgccatgcgggacctgcgcgcggcgctggacgcggtg
gcgccgctggcgcatgcgctgctgcgccacgccgccggccagatcgcccggcgggtggcg
gaactcaagcggcgcaaccgccagttcggcttcgccgacatgctggcgcgcctgaaggag
gcgctcgaaggaccgaacggcgcggcgctgcgccagcgcatcctcgaccagttcccggtg
gcgatggtggatgaattccaggacacctcgcccgaccagtaccgcatcttcgacctgctg
taccgggtggccgacaacgatccggcgcgcggcctgttcctgatcggcgaccccaagcag
tcgatctacggcttccgcggcgccgacatccacagctacctggcggcgcggcgcgccacc
gccgggcgccactaccagctcggcaccaattaccgctcgacggcgcagctggtgcgggcg
gtcaaccgcctgttccagtacgccgagggcgaggccggcgatcccgggcagccgggctac
gccgccggcgccttccgcttccgcaaggatggcgacaatccgctgccgttcgaggcggtg
gcggcggccgggcgccgccagcagctggtcggcgtggacggaccgttccaggcgctggcg
gtgtgctccaccgggcgcgacgacctgcgcaccgacgactaccgcgcgttcttcgccgag
cactgcgccgagcacatcgtcacgctgctgaacgacgcccgggtcggcttcggcgacccc
gggggcggcttccagcgcctggtgccggcggatatcgccatcctggtgcgcgaccggcgc
gaggcggccgcggtgcgccatgcgctggcgcggcggcgcgtggccagcgtctacctgtcc
gaccaggactccgtgctggacagcgaagaggcggccgacatgctgcgctggctgcaggcg
gtcgccaatccgctcgacggcgccctggcgcgcgccgccttcgccaccgctacctgcgcg
ctgccgctggccgcgctggcgcgcctggccagcgacgagcaggcctgggaaaaccgcgtc
gagcaattgaagaacctgcaccaggcctggcagcgccagggcgtgctggccatgctgcgc
cgcttcatccacgaactcggcctgccgtcgcagctgctggcggccggcggcggcgaacgc
cggctcacgaacctgctgcacctggccgagctgctgcaggaagccagccgcgagctggac
ggcgagcaggcgctgatccgctggttcgccgagcagatcgacggcatgggcgaggccggc
gacgagcgcgtgctgcgcctggagagcgatgccgagctggtcaaggtggtcacggtgcac
aagtcgaagggcctggaatacccgctggtgtacctgccgttcgccgtcaccgcgaggaag
accgagcgcaggaaccgcgcctttttcgaatacgtcgacgacggcggcgcgcgccgcatc
gacctgggcctgggcgacgcggcattggaagcggtcgaccgcgcgcgcctggaggaagac
ctgcgcctgctgtacgtggcgctcacgcgcgcgcgccacttcctgtggctgggcgtggcc
gcggtggccgccggcaggaagggcgagaaccgcctgcacgaatcggcgctcggctacctg
ttgaccggcggcgaggcgatcccggcggcgtcgatgggcgcgcgctggcagcgcctgcgc
ggcgacgtcgacggcatcgcgctgcacgacctgcagccgctggacggcttcaccgtgctg
gcgcgccaggatgcgcgcccggaactgctgcgcgccgcccccttcgagcatgccttcgag
cgcaactggtcgatcggctcgttcacctcgctgacccggcacacggtggcgccgccgacg
cgtccgcaggaagagaacctgatggaagaggcggaagcgggcgcggtcgagcctgtgcgc
gtcgaggacgcgccctggcaccgcttcccgcgcggcgccacgccgggcaacttcctgcac
gagcagctcgaatggatggcgcaggaaggcttcgatcgcattgacgacgcggagcacggc
gcgcgcctggcccagcgcatcgaacgcgccggctgggccaaccgcctggacgatgccctg
gcgtggctgcgcgcgctggcgacgacgccgctgccgccgctggacgccgccctggccgac
ctggcgcgcgaaggcacgctgctgccggagatggaattctggttccccagccgcagcctc
gacgtgggcgcgctggaccgcctgtgccgcgcccgcctgctgggcgacgtggcgcgcccg
acgctgcccgagcgccagctgcacggcatgctgaagggcttcaccgacctggtattcgag
caccggggccgctactgggtgctcgactacaagtcgaacgcgctggggccgggcgacgcc
gcctacacgcaggcggcgatggcggccggcatggccgggcaccgctacgacatccagggc
gcgatctacctgctggcgctgcaccgcctgctgcgtgcgcgcctgggcgccgcctacgat
cccgccacacaactgggcggcgcgctgttcctgttcctgcgcgggatcgccagcccggcc
acccacggctgcttcctgctggcgccggacctggaattgctcgacgggctggatggcctg
ttgggcgatggagaacgcacatga
DBGET
integrated database retrieval system
