Massilia forsythiae: HH212_23255
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Entry
HH212_23255 CDS
T08391
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mfy
Massilia forsythiae
Pathway
mfy03410
Base excision repair
mfy03430
Mismatch repair
mfy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH212_23255 (recJ)
03430 Mismatch repair
HH212_23255 (recJ)
03440 Homologous recombination
HH212_23255 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfy03400
]
HH212_23255 (recJ)
DNA repair and recombination proteins [BR:
mfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HH212_23255 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HH212_23255 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HH212_23255 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QJE03557
UniProt:
A0A7Z2W1Y1
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All DBs
Position
5550214..5551863
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AA seq
549 aa
AA seq
DB search
MLRQGGIHPVLARVFAARGLSDPRELASELQALVPPGALLQIDAAAAYLADAIQDRKKMT
IVADYDCDGATACAVALRGLRAMGAEVDFIVPNRFEYGYGLTPEIVELTAREKAPDIILT
VDNGIASIDGVEAARRRGIEVVVTDHHLPGERLPDARVIVNPNQPECGFPSKNLAGVGVV
FYVLLALRAELRKRGTFDAQSQPKLDSLLDLVALGTVADVVKLDTNNRILVAQGLKRMRA
GRMHAGVAALFRVAGREARTASPFDLGFALGPRLNAAGRLQDMSLGIECLTTDDEGRAWA
IAQQLNEINLKRREIEADMQGTALLHLDDFSPADASTIAVFDDGWHQGVIGIVASRLKEK
FYRPTITFAPAGDGWIKGSGRSIPGFHMRDALDLVSKRVPGLIDKFGGHAMAAGLTIRGE
HFDTFTQAFEAVGRAWLTEAQLERVVETDGPLEDDFYSTQFIELVDGQVWGQGFAPPVFV
DEFRVVSQRILKDKHLKLLLERNGRRYDAIWFGHVDALGDKARVAFRLDANEYNGVTKVQ
LLVEHAEPA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccagggcggcatccatcccgtgctggcgcgcgtgttcgccgcgcgcggcctg
tccgacccgcgcgaactggccagcgagctgcaggcgctggtgccgcccggcgccctgctg
cagatcgacgccgccgccgcctacctggccgacgcgatccaggaccgcaagaagatgacc
atcgtcgccgactacgattgcgacggcgccaccgcctgcgcggtcgcgctgcgcggcctg
cgcgcgatgggcgccgaggtcgacttcatcgtccccaaccgcttcgagtacggctacggc
ctgacgcccgagatcgtcgagctgaccgcgcgcgaaaaggcgccggacatcatcctcacc
gtcgacaacggcatcgccagcatcgacggcgtggaagcggccaggcggcgcggcatcgag
gtcgtggtcaccgaccaccacctgcccggcgagcgcctgccggacgcgcgcgtgatcgtc
aacccgaaccagcccgaatgcggcttcccgagcaagaacctggccggcgtcggcgtggtg
ttctacgtgctgctggcgctgcgcgccgaactgcgcaagcgcggcacgttcgacgcgcaa
agccagcccaagctggacagcctgctcgacctggtggcgctgggcaccgtggccgacgtg
gtgaagctcgacaccaacaaccgtatcctggtggcgcagggcctgaagcgcatgcgcgcc
ggacgcatgcatgccggcgtggcggcgctgttccgggtggccgggcgcgaggcgcgcacc
gcctcgccgttcgatctcggcttcgcgctcggtccgcgcctgaacgccgccggccgcctg
caagacatgtcgctcgggatcgagtgcctgaccaccgacgacgagggccgcgcctgggcc
atcgcccagcagctcaacgagatcaacctcaagcggcgcgagatcgaggccgacatgcag
ggcaccgcgctgctgcacctggacgacttcagcccggccgacgccagcaccatcgccgtg
ttcgacgacggctggcaccagggcgtgatcggcatcgtcgcctcgcgcctgaaggaaaag
ttctatcgcccgaccatcacattcgccccggccggcgacggctggatcaagggttcggga
cgctcgatccccggtttccacatgcgcgacgcgctcgacctggtgtccaagcgcgtaccc
ggcctgatcgacaagttcggcggccacgcgatggcggccggactgaccatccgcggcgag
cacttcgacaccttcacccaggctttcgaagcggtcgggcgcgcctggctgacggaagcc
cagctggaacgcgtggtcgagaccgacggcccgctggaagacgatttctattcgacccag
ttcatcgagctggtcgacggccaggtgtggggccagggcttcgcgccgccggtgttcgtc
gacgagttccgcgtggtcagccagcgcatcctgaaggacaagcacctgaaactgctgctg
gaacgcaacggccgccgctacgacgcgatctggttcggccacgtcgatgcgctgggcgac
aaggcgcgggtggcgttccggctcgacgccaacgagtacaacggcgtgaccaaggtgcag
ctgctggtggagcacgccgagccggcgtga
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