Methanosarcina flavescens: AOB57_001785
Help
Entry
AOB57_001785 CDS
T05666
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mfz
Methanosarcina flavescens
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfz03016
]
AOB57_001785 (truD)
Enzymes [BR:
mfz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AOB57_001785 (truD)
Transfer RNA biogenesis [BR:
mfz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AOB57_001785 (truD)
Prokaryotic type
AOB57_001785 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AYK14101
UniProt:
A0A660HP88
LinkDB
All DBs
Position
414752..416068
Genome browser
AA seq
438 aa
AA seq
DB search
MQVPEIEKQIGINLYSTDTDGLGGQLRQEVEDFIVKEITNREEGQEGKYLILELVKRDWD
THHFTRTLAKILKISQKRISVAGTKDKRALTTQKISIFDIDASEIEKIHLKDIELKVLGR
SRKPVELGDLWGNDFIITIRNIARSTEETGKLLEKTTNEIVAQGGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAAMLYIAEPFPYEPEETKQARQFVKETRNFKEGLKIYPLRLGHE
RAMMNHLIANPDDFAGAFLVLPKNLYRIFVHGYQSYIYNTILCRRIEKGLPLNQAVEGDI
VCFKNELGLPDSSKTEKVTAETVNAMNNLIKRKRAFITAPLPGYDTEFASGVPGEIEQAV
LEELKVPLQGFNIEEIPEMSSKGARREILLQVEPKFEVNEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgccggaaattgaaaaacagataggaataaacctttactccacagataccgac
ggtcttggaggacagctccgccaggaagtggaagattttattgttaaagagattacgaat
cgggaagaaggacaggaaggaaaatatcttatccttgaactcgtaaaacgagattgggat
acacaccattttacccggacccttgcgaaaattcttaagataagccagaaaaggatcagt
gttgcaggcacaaaggataaacgtgcacttaccactcaaaaaatcagcatttttgatatt
gatgcctccgaaattgaaaaaattcatttaaaagacattgagctgaaagtcctgggccgc
tcccgtaaacccgtagaattaggagacctttggggaaatgatttcataattactatacgg
aacatagcccgttcgactgaggaaacaggcaaactgttagaaaagactacaaacgagatc
gtagctcagggcggcgtcccaaacttcttcggaatccagcgttttggttctgtacgccct
gttacacatctggtagggaaagccattgtagagggagatttcgaaaaagccgccatgctc
tatattgccgaacccttcccttatgagccagaagaaacaaaacaggctcgccagttcgtt
aaggaaacccgtaattttaaggaggggctaaaaatctatcctttacgccttgggcatgaa
agggcaatgatgaaccatctgatagctaaccctgatgacttcgcaggcgcttttctggtg
ctcccgaaaaacctgtatagaatattcgtgcatggttaccagtcgtatatttataatacc
atcctgtgcagaagaattgaaaaaggtcttcccttaaatcaggctgtggaaggcgatatt
gtctgttttaagaatgagctcggtctgcctgattcatcaaaaactgaaaaagttaccgct
gagactgtaaatgccatgaacaacctgattaaaagaaaaagggcattcataaccgctccc
cttccgggctatgatactgagtttgcttcaggcgttccgggagagatcgaacaggcggtt
cttgaagaattaaaagttcctctgcagggtttcaatattgaagaaattccggaaatgagt
tcgaaaggcgccaggagggaaatcctccttcaggttgaaccgaaatttgaggttaacgaa
gatgaacttaatcccggaaaatcaaaggctgtgcttgaatttatgctgccaaagggaagt
tatgcaacaaccgtactcagggaatatatgaaggtagatcctctgcagatgagctga
DBGET
integrated database retrieval system
