KEGG   Methanosarcina flavescens: AOB57_002425
Entry
AOB57_002425      CDS       T05666                                 
Name
(GenBank) AAA family ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mfz  Methanosarcina flavescens
Pathway
mfz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mfz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AOB57_002425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mfz03019]
    AOB57_002425
   03009 Ribosome biogenesis [BR:mfz03009]
    AOB57_002425
   04131 Membrane trafficking [BR:mfz04131]
    AOB57_002425
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mfz04147]
    AOB57_002425
Messenger RNA biogenesis [BR:mfz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     AOB57_002425
Ribosome biogenesis [BR:mfz03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    AOB57_002425
Membrane trafficking [BR:mfz04131]
 SNARE
  SNARE associated proteins
   Others
    AOB57_002425
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    AOB57_002425
Exosome [BR:mfz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AOB57_002425
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_5 AAA_2 AAA_14 TIP49 AAA_22 CDC48_2 AAA_33 NACHT IstB_IS21 NPHP3_N nSTAND3 ABC_tran Mg_chelatase Parvo_NS1 AAA_28 Sigma54_activat RNA_helicase AAA_24 AAA_7 AAA_18 NB-ARC Zeta_toxin TsaE ATPase AAA_lid_PRS2_C AAA_25 PhoH AAA_17 Vps4_C AAA_3 AAA_11 ORC-CDC6-like SLFN-g3_helicase ResIII Sigma54_activ_2 DUF815 AAA_30
Other DBs
NCBI-ProteinID: AYK14200
UniProt: A0A660HPK4
LinkDB
Position
complement(549304..551598)
AA seq 764 aa
MTDMDKTTVKLKVAEADQRDVGKGIVRIDESFREKLGLKPFDVVEIKGGKSTSALIGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVEIRKADWKEAKNVTLAPVAKGMQIYAPSETLKA
IFMNRTVSKGDFISTTSLRKSRERETLGKGVMFEDFFQDFFGQGFGPSFGLGDIKLQVVS
TSPSGIVKITDLTQVELLPEATEVTPEQNIPSVMYEDLGGVKEAIGKVREMIELPLKHPE
LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFEDAERNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEALDVALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLADDVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRVLPKINLNEPEIPAEILDSLQVIREDFENALKDVQPSAIREIL
IEVPTVSWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGT
STGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPIPD
EGARREIFKVHTGKMSLAEDVDIEKLVSMTDQYTGADIAAVCKKAGRLALREDLHAKNVR
QRHFLKAIAETGPSVTPDTMKYYEAIKGELRKKKSKEIENPSYI
NT seq 2295 nt   +upstreamnt  +downstreamnt
ttgactgatatggataaaacaacagtaaaattgaaagttgcggaagccgatcaacgagat
gttggaaagggcattgtccggatagatgaaagcttccgggaaaaattgggtctcaagccc
ttcgatgttgtggaaatcaaaggggggaaatctacttctgcactgataggtcgtccgtat
cctagtgattctggtcttgatatcatacgtatggatgggcttatccgcaccaatgcaaaa
accagtataggagaatatgtggagattcgcaaagccgactggaaagaagcaaaaaatgta
actctagcacctgtagccaaaggtatgcaaatctatgctcccagcgaaactcttaaagct
atattcatgaatcgtacggtttcaaagggggattttatttcaaccacaagcttaaggaag
tcgagggagagggagaccctgggtaaaggagtgatgttcgaggattttttccaggacttc
ttcggccagggcttcgggccatctttcgggctcggagatataaaactgcaggtagtttct
acttctccgtcagggatagtaaagattacagacttaacgcaggtagagcttttgcctgaa
gcgactgaagtaacccctgagcaaaatattccttctgttatgtatgaagatttgggtggg
gtcaaagaagccattgggaaagtcagggaaatgatagagctgcctttgaaacatcctgaa
ctttttgataggctcgggatcgatgccccaaaaggagtattgctccacggcccgccaggc
acaggcaaaacaatgcttgcaaaagcagtagccaatgagtcagatgcctacttcatttct
attaacggtccggagattatgtcgaaatactacggtgaatccgaaagggctataagggag
attttcgaggatgcagaaaggaatgctcctgcgattatttttcttgatgagatcgattcc
attgcccctaagagagccgaggtaaccggagaagtcgagagaagagtagttgctcaactt
ctatccctgatggatgggcttaaagctcgcaagaatgtaattgtcatagggtcaactaac
cgtcctgaagctttggatgtagcacttcgccgtccagggaggtttgaccgggaaattgaa
ctgagagtcccggatactgatggaagactggaaattttccagatccatacacggggaatg
cctcttgcagatgatgtaaacctcatggattttgctcaaataacgtatggatttgttggg
gctgacattgcagccctgtgcagagaagcagccatgagttctttgaggcgggttctgccg
aaaattaatctcaatgaacctgaaatcccggctgaaatcctggattctctgcaggtaata
agggaagattttgaaaatgctcttaaggacgtccagccatcggcaataagggaaatccta
attgaagtacccacagtgagctgggatgacgtaggaggcctggaagaagtaaaaaggcta
ctgaaagaggtagtggaatggccacttaagaatccggaatcttacagggacataggagtt
gaagctcctaaaggtgtccttctatatgggcctccaggtacgggaaagactctactcgca
aaagcaatagctcatgaatcggatgctaattttatcacagccaaaggaagcgatctcctt
tccaaatggtatggggaatctgaaaaaaggattgcggaagtttttacacgggcaaggcag
gttgccccctcaattatttttctggatgaacttgattcgcttgcacccattcgagggact
tctacaggggagccccaggttacggcgagaatccttaatcagttactctcagaaatggac
ggacttgaagaactcagggctgtagtggtaattggcgcgaccaatcgccctgatgtcatc
gaccctgcccttatccgtccagggcgctttgatgagctcattctcgttccaattcctgat
gagggggctcgcagggaaatattcaaagtccataccggaaaaatgtcgctcgcagaggat
gttgatatcgagaaactcgtttccatgaccgatcagtatacaggtgcagatattgcggct
gtgtgcaagaaggcaggaaggcttgctttgcgtgaggatcttcatgcgaaaaatgtcagg
cagaggcacttccttaaagcaattgcagagactggtccttcagttactcctgatactatg
aaatattacgaagctataaaaggtgaactcaggaaaaagaaatccaaggagatagagaac
ccttcttacatttga

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