Methanosarcina flavescens: AOB57_002425
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Entry
AOB57_002425 CDS
T05666
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mfz
Methanosarcina flavescens
Pathway
mfz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AOB57_002425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfz03019
]
AOB57_002425
03009 Ribosome biogenesis [BR:
mfz03009
]
AOB57_002425
04131 Membrane trafficking [BR:
mfz04131
]
AOB57_002425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfz04147
]
AOB57_002425
Messenger RNA biogenesis [BR:
mfz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AOB57_002425
Ribosome biogenesis [BR:
mfz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AOB57_002425
Membrane trafficking [BR:
mfz04131
]
SNARE
SNARE associated proteins
Others
AOB57_002425
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AOB57_002425
Exosome [BR:
mfz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AOB57_002425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
TIP49
AAA_22
CDC48_2
AAA_33
NACHT
IstB_IS21
NPHP3_N
nSTAND3
ABC_tran
Mg_chelatase
Parvo_NS1
AAA_28
Sigma54_activat
RNA_helicase
AAA_24
AAA_7
AAA_18
NB-ARC
Zeta_toxin
TsaE
ATPase
AAA_lid_PRS2_C
AAA_25
PhoH
AAA_17
Vps4_C
AAA_3
AAA_11
ORC-CDC6-like
SLFN-g3_helicase
ResIII
Sigma54_activ_2
DUF815
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AYK14200
UniProt:
A0A660HPK4
LinkDB
All DBs
Position
complement(549304..551598)
Genome browser
AA seq
764 aa
AA seq
DB search
MTDMDKTTVKLKVAEADQRDVGKGIVRIDESFREKLGLKPFDVVEIKGGKSTSALIGRPY
PSDSGLDIIRMDGLIRTNAKTSIGEYVEIRKADWKEAKNVTLAPVAKGMQIYAPSETLKA
IFMNRTVSKGDFISTTSLRKSRERETLGKGVMFEDFFQDFFGQGFGPSFGLGDIKLQVVS
TSPSGIVKITDLTQVELLPEATEVTPEQNIPSVMYEDLGGVKEAIGKVREMIELPLKHPE
LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE
IFEDAERNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN
RPEALDVALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLADDVNLMDFAQITYGFVG
ADIAALCREAAMSSLRRVLPKINLNEPEIPAEILDSLQVIREDFENALKDVQPSAIREIL
IEVPTVSWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLA
KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGT
STGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPIPD
EGARREIFKVHTGKMSLAEDVDIEKLVSMTDQYTGADIAAVCKKAGRLALREDLHAKNVR
QRHFLKAIAETGPSVTPDTMKYYEAIKGELRKKKSKEIENPSYI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatatggataaaacaacagtaaaattgaaagttgcggaagccgatcaacgagat
gttggaaagggcattgtccggatagatgaaagcttccgggaaaaattgggtctcaagccc
ttcgatgttgtggaaatcaaaggggggaaatctacttctgcactgataggtcgtccgtat
cctagtgattctggtcttgatatcatacgtatggatgggcttatccgcaccaatgcaaaa
accagtataggagaatatgtggagattcgcaaagccgactggaaagaagcaaaaaatgta
actctagcacctgtagccaaaggtatgcaaatctatgctcccagcgaaactcttaaagct
atattcatgaatcgtacggtttcaaagggggattttatttcaaccacaagcttaaggaag
tcgagggagagggagaccctgggtaaaggagtgatgttcgaggattttttccaggacttc
ttcggccagggcttcgggccatctttcgggctcggagatataaaactgcaggtagtttct
acttctccgtcagggatagtaaagattacagacttaacgcaggtagagcttttgcctgaa
gcgactgaagtaacccctgagcaaaatattccttctgttatgtatgaagatttgggtggg
gtcaaagaagccattgggaaagtcagggaaatgatagagctgcctttgaaacatcctgaa
ctttttgataggctcgggatcgatgccccaaaaggagtattgctccacggcccgccaggc
acaggcaaaacaatgcttgcaaaagcagtagccaatgagtcagatgcctacttcatttct
attaacggtccggagattatgtcgaaatactacggtgaatccgaaagggctataagggag
attttcgaggatgcagaaaggaatgctcctgcgattatttttcttgatgagatcgattcc
attgcccctaagagagccgaggtaaccggagaagtcgagagaagagtagttgctcaactt
ctatccctgatggatgggcttaaagctcgcaagaatgtaattgtcatagggtcaactaac
cgtcctgaagctttggatgtagcacttcgccgtccagggaggtttgaccgggaaattgaa
ctgagagtcccggatactgatggaagactggaaattttccagatccatacacggggaatg
cctcttgcagatgatgtaaacctcatggattttgctcaaataacgtatggatttgttggg
gctgacattgcagccctgtgcagagaagcagccatgagttctttgaggcgggttctgccg
aaaattaatctcaatgaacctgaaatcccggctgaaatcctggattctctgcaggtaata
agggaagattttgaaaatgctcttaaggacgtccagccatcggcaataagggaaatccta
attgaagtacccacagtgagctgggatgacgtaggaggcctggaagaagtaaaaaggcta
ctgaaagaggtagtggaatggccacttaagaatccggaatcttacagggacataggagtt
gaagctcctaaaggtgtccttctatatgggcctccaggtacgggaaagactctactcgca
aaagcaatagctcatgaatcggatgctaattttatcacagccaaaggaagcgatctcctt
tccaaatggtatggggaatctgaaaaaaggattgcggaagtttttacacgggcaaggcag
gttgccccctcaattatttttctggatgaacttgattcgcttgcacccattcgagggact
tctacaggggagccccaggttacggcgagaatccttaatcagttactctcagaaatggac
ggacttgaagaactcagggctgtagtggtaattggcgcgaccaatcgccctgatgtcatc
gaccctgcccttatccgtccagggcgctttgatgagctcattctcgttccaattcctgat
gagggggctcgcagggaaatattcaaagtccataccggaaaaatgtcgctcgcagaggat
gttgatatcgagaaactcgtttccatgaccgatcagtatacaggtgcagatattgcggct
gtgtgcaagaaggcaggaaggcttgctttgcgtgaggatcttcatgcgaaaaatgtcagg
cagaggcacttccttaaagcaattgcagagactggtccttcagttactcctgatactatg
aaatattacgaagctataaaaggtgaactcaggaaaaagaaatccaaggagatagagaac
ccttcttacatttga
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