Methanosarcina flavescens: AOB57_003115
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Entry
AOB57_003115 CDS
T05666
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mfz
Methanosarcina flavescens
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfz03400
]
AOB57_003115
DNA repair and recombination proteins [BR:
mfz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOB57_003115
Archaeal homologous recombinant proteins
AOB57_003115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
DUF2937
SbcC_Walker_B
ABC_tran
DUF6244
Motif
Other DBs
NCBI-ProteinID:
AYK14311
UniProt:
A0A660HPU8
LinkDB
All DBs
Position
complement(718859..722083)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLYIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVIFKGAETAKISLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYANGECIVDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINARPRDRQRMIDDLLQLGKLEEYRERAGSAK
TAVKRLQRDVGSNLSAVKAEIEKIESTEPHAVLNGLRQKIKECDAALEKCNKDKEVAAAQ
KEKLDMMIAEYRERLQEINTLKQALLKSQESKASCIREREILSGETHEQRQVLLGLEWEN
NSIREECGFGDLDIETLSLQQEKEEFLVREKMNGISKELALLLREKEIHTQALSDLEKEK
AEVEQIFMQCRADIGATNREIEKNRKSILKIEEENKRLKETAKDAINFSETYEISLFIKE
LEEKESLLHERRNEASTKLALAFKEKETGDINLLTLDKELQNFRVAVQKGKTEIEILEEK
LRENARAVQEVQEQKSEASTGLKGLGFTGEQLEDLESLSELLLENKNRLHGREKELEATI
RELDKVLRKNQQLLAEGKCPTCGQELKGSEIACMAEESEQKKEKLAAELLDIKLQQAEIE
KKLNRLKDAKKLEKRISDYDLEIEKLRNKAKEIQERITIHKTRIEEDSLKLEGLNRQKQE
LETKMGQLLPDIKALQGWEEAARKAHSESEKTLREAKAFEKKLAENASEIDVLNGKIRTS
LTLIENYGQRLGELNEKLIGLAERENLEKEKLKALGVELEALRTKEDLAKKAHQKSENLL
LQVKKLRANLLRMDIIKHKISELEASIKNLTEKIGFFDREILERNERVKQLERKLQGHRF
EDLQNKRALLEAYQANLSEKIRQITASKDAFLKEAGMIENSLKRRNELKEELKALENRQL
YLEAVYSNAEDLENMYVRVRADMRARNIGALSTLLNEMFSFMYTNNAYSHIELDSEYNLK
VYRKDGTPLQPKLLSGGERAIFNLVLRCAIYRLLALGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDLMRSIGVGQIIVVSHDETLIDSADHVFQVEKDPLTNMSSIVKV
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctcaaaaacctgtatatcgaaaacattcggagttataagaaactggattttaca
tttgaagacggagttacagtcatttccggggttaacgggagcgggaagtccagcctgctt
gaagcctgttttatggggcttttcgggagtaaaatcctctcaaaggattttgtgcttgca
gatgtaatctttaaaggggctgaaactgcgaaaataagcctgggttttgagcatttaggg
caggattatcttatcgaacaagctttcaggtattcgtctaaaagtgaaaatgcttcgaac
tcaaaatgcgtactctatgccaatggagaatgtatcgtcgatcaggctacacggacttac
gaagaggtctgttcccttttaaatatggatgaagaggcatacaggaactgcgcttacatc
cggcagggcgaaattgatgtactcattaatgcaagaccaagagacaggcagcgcatgata
gatgaccttttacagcttggaaaacttgaagagtacagggaaagagcaggcagtgcaaaa
acggctgtcaaaaggcttcaaagggatgtaggtagcaacctttcagccgtaaaagccgaa
atcgagaaaattgaaagtacggaaccacatgcagtgctgaacgggctcaggcagaagata
aaggaatgcgatgcagcattagaaaaatgtaataaagataaagaggttgcagcagcccaa
aaagaaaaactcgatatgatgattgcagagtacagggaacgacttcaagaaatcaacact
ctgaaacaggccctacttaaatcccaggagagtaaagctagctgcatcagggaaagagaa
atcctctcaggagaaacccatgagcaaaggcaggttctgctcggactggaatgggaaaat
aattctatccgggaagaatgcggctttggagaccttgatattgagacactgagcttgcaa
caggaaaaagaagagttccttgtcagggaaaagatgaatgggatttcaaaagaacttgct
ctccttctaagggaaaaggaaatccacactcaggccttaagtgaccttgaaaaagagaag
gctgaggttgaacagatattcatgcagtgcagggctgatataggagctacaaatagggaa
atcgaaaaaaacaggaaaagtatcctgaaaatcgaggaagaaaataaaagacttaaggaa
actgcgaaagatgctataaatttctccgaaacctatgaaatttccttatttataaaggaa
ctggaagaaaaagagagcctattgcatgaaaggagaaacgaagcctctacaaagcttgct
cttgccttcaaagaaaaagaaaccggagatataaatcttctcacgcttgataaggaactt
caaaatttcagggtcgcggtccagaagggcaaaaccgaaattgagatccttgaagaaaag
ctccgggagaatgcaagggcagttcaggaggtccaggaacagaagtccgaagcttccaca
gggctaaaggggcttgggttcaccggagaacagcttgaggatctggaatctctaagtgaa
ctgcttctggagaataaaaacaggctgcatgggcgggaaaaagagcttgaggcgaccatc
agagagcttgataaggtactccgtaaaaaccagcaattgcttgccgaaggaaaatgccca
acctgtgggcaggagcttaaaggctcagagattgcctgcatggcagaggaatctgaacag
aagaaagaaaagcttgcagcagaacttcttgatataaagctccagcaggctgagattgag
aaaaagctcaaccgactaaaggatgcaaaaaagctggagaaaaggatctcggattacgac
ctggaaatcgaaaaactcaggaataaagcaaaagagattcaagaaaggataacgatccat
aaaacccggattgaggaagattcccttaaactcgagggacttaacaggcaaaagcaggaa
cttgaaactaaaatgggtcagctcctacccgatataaaagcccttcagggctgggaggaa
gcagccaggaaagcccacagcgagagtgaaaaaactcttcgggaggcaaaagcctttgag
aaaaagcttgctgaaaacgcttcggagattgatgtcctgaatggaaaaataaggacatct
cttacactgattgaaaactatgggcagaggcttggagagctcaatgaaaaattgatagga
cttgccgaacgtgagaatctggagaaggagaaactcaaggctctgggagttgagcttgag
gcattgaggacgaaagaagacctggcaaaaaaagcccatcagaaaagcgaaaatctcctc
ctgcaagtaaaaaagctcagagcgaatctgctccgcatggatatcataaagcacaaaatt
tccgagcttgaagcttccataaagaaccttacggaaaagatcggtttctttgaccgggaa
atccttgaaagaaatgagcgggtgaaacagcttgagagaaagctacagggacataggttt
gaagatctccagaataaacgtgctctgcttgaagcgtatcaggcaaacctttccgagaaa
atccgacaaattacagcttcaaaagatgcatttttaaaagaagccggtatgatcgagaac
agcttaaaacgccgcaatgagctgaaagaagaactcaaagctcttgaaaacagacagcta
tatcttgaagccgtgtacagtaatgctgaggatcttgagaacatgtatgtgcgtgttcgg
gctgatatgcgggcaagaaacataggggccctttctaccctgctgaatgaaatgtttagc
ttcatgtacacgaacaatgcatattcccatatagaactcgactcggagtataaccttaag
gtttacagaaaagacggtacgcctcttcagcccaaactcctcagcgggggagaacgtgcc
atttttaatcttgtcctgcgctgcgctatctacagacttcttgctctcggttttggtggt
gacagggcagatgggcttccgcccatgattttagacgagcccactgttttcctggaccgc
ggacatataaaccagcttttgaaactcatagacctgatgcgcagcataggggtaggtcag
attattgtagtctcccatgacgaaaccctaatagattccgcagaccatgtcttccaggta
gaaaaagatcctcttaccaatatgtcgtctattgtaaaagtttaa
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