Methanosarcina flavescens: AOB57_003780
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Entry
AOB57_003780 CDS
T05666
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mfz
Methanosarcina flavescens
Pathway
mfz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AOB57_003780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfz03021
]
AOB57_003780
Transcription machinery [BR:
mfz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
AOB57_003780
Prokaryotic type
Archaeal type
TFE
AOB57_003780
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
RepL
HVO_2753_ZBP
Pox_vIL-18BP
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AYK14427
UniProt:
A0A660HQ94
LinkDB
All DBs
Position
863758..864252
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AA seq
164 aa
AA seq
DB search
MVDLNDKVIRGYLMSLVGEEGLQMIEKMPEGEVTDEEIATETGILLNTVRRTLFILHENK
FAICRRERDSNSGWLTYLWHLDFSDIEHQLMKEKKKLLRNLKTRLEFEENNVFYSCPQGC
VRLLFDEATETEFLCPMCGEDLAFYDNSYFIEVLKKRVDALSSA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgacttaaatgacaaggtaattagaggatatcttatgagccttgtaggggaagaa
gggctacagatgatagaaaaaatgcccgaaggtgaggttacggatgaagaaattgcgaca
gaaaccggaattctgctgaacaccgtgaggagaacgctcttcatactacatgagaataaa
tttgcaatctgccgcagggagagagattcaaacagcggatggttgacatacctctggcac
ctggacttttctgatatagagcaccagcttatgaaggaaaagaaaaaattactccgaaac
ctgaaaactcgccttgaattcgaagaaaataatgttttctattcttgccctcagggctgt
gttcgcctcctttttgacgaagctacggaaactgaatttctctgccctatgtgtggagaa
gacctggctttctacgacaattcatactttatagaagtcctgaagaaacgcgtagatgct
cttagttcggcatga
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