Methanosarcina flavescens: AOB57_004710
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Entry
AOB57_004710 CDS
T05666
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mfz
Methanosarcina flavescens
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfz03016
]
AOB57_004710 (thpR)
Enzymes [BR:
mfz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AOB57_004710 (thpR)
Transfer RNA biogenesis [BR:
mfz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AOB57_004710 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AYK16314
UniProt:
A0A660HVN4
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All DBs
Position
complement(1038205..1038750)
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AA seq
181 aa
AA seq
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MIRTFIAVELDPGFIEKIRELQDRFSGFDLKFVDPELVHITLKFLGNVDESKIPSLSAAL
DSITCEPFETKIGRLGVFPKPSNPRVLWLGATGNFWALHENVENLLEPFKFEKDDREFTA
HATLARIKFLKKDKKNAFINTVKELKDIEIGTMWVNKVALKKSTLTPEGPIYETLHTVYM
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaggacatttatagcagtagaattagatcccggatttatagagaagattcgagag
cttcaggatagattttccggttttgatctaaagtttgttgatcctgaactcgttcatata
actttgaaattccttggaaatgtggacgaatcaaagattccatcgctttccgcagccctc
gattccattacgtgtgaaccttttgagacaaaaatcgggaggcttggagttttccccaaa
ccttcgaatcctagagtgctatggctgggtgcaactggaaatttctgggcgttacatgag
aatgtggagaatttactggaacctttcaagttcgaaaaagatgacagggaatttaccgca
catgctactcttgccaggataaaattcctcaagaaagataagaaaaatgcctttataaat
accgtgaaggagttaaaggatattgaaattggtaccatgtgggtaaataaagtggctcta
aagaaaagcacacttacccctgaaggaccaatttatgaaaccctgcacacagtgtacatg
gattaa
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