KEGG   Methanosarcina flavescens: AOB57_006670
Entry
AOB57_006670      CDS       T05666                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mfz  Methanosarcina flavescens
Pathway
mfz03030  DNA replication
mfz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mfz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOB57_006670 (fen)
   03410 Base excision repair
    AOB57_006670 (fen)
   03450 Non-homologous end-joining
    AOB57_006670 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfz03032]
    AOB57_006670 (fen)
   03400 DNA repair and recombination proteins [BR:mfz03400]
    AOB57_006670 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mfz04147]
    AOB57_006670 (fen)
DNA replication proteins [BR:mfz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AOB57_006670 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AOB57_006670 (fen)
DNA repair and recombination proteins [BR:mfz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AOB57_006670 (fen)
Exosome [BR:mfz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AOB57_006670 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc eIF3_N
Other DBs
NCBI-ProteinID: AYK14922
UniProt: A0A660HRS0
LinkDB
Position
complement(1478111..1479127)
AA seq 338 aa
MGTDIGSLLQKRKAKLSDFTNQVVAIDGFNTLHQFLSIIRQRDGSPLIDSTGRVTSHLSG
LLYRTASLVEAGIKPLFVFDGKPPDLKSKTLSKRKEVRESSWEKWESAKAAGDLKSAYKY
AQASSKVNQEIIEDSKYLLDIMGIPFVQAPCEGEAQAAHIVLKGDANCVASQDYDSFLFG
APVVVRNLAITGKRKLPGKNAYIDVEPEIIELEETLKALEITREQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGDIYAVLREKGAEIEAVDRIREIFLHPDVTENYEIKWGKPDSEK
LLKFLCEDHDFSIDRVEKAAERLKAASGARQRTLDQWI
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggtacagatataggcagcctgctccagaaaagaaaagctaagctctcggattttaca
aaccaggtggttgcaattgacggttttaacacgctgcaccagtttttgagcattattcgc
cagcgggatggaagccctctgatcgattccacagggagggtaacctctcatctctcaggc
ctgctctaccggacagcaagccttgttgaagccgggatcaagcctctttttgtttttgac
ggcaagcctcctgacctcaagtccaaaactctgagtaaaaggaaagaagtaagggagtct
tcatgggaaaaatgggaaagcgcaaaggctgcaggagatttaaaatcggcttataagtat
gctcaggcttcttcaaaggtaaatcaggagatcattgaagattccaagtacctgcttgat
attatgggaattccttttgttcaggctccctgtgagggagaagcgcaggctgcacatatt
gttcttaaaggagatgcgaactgtgttgcatcacaggattatgattcattccttttcgga
gctccggttgtcgtccggaatctggcaatcacgggaaaacgcaagcttcccggaaaaaac
gcttacattgatgtcgagcccgaaataattgagctggaagagactctcaaagccctggaa
attactagggagcagctcatagatatagcaatatgtgtgggaacggattataacaaagga
ctggaaaaagtaggtcctaaaacagcactcaaacttattaaaaagcatggagatatttac
gccgtgctccgtgaaaaaggggcagagatcgaagctgtggacaggatcagggaaattttt
ctccatcctgatgtaacggagaactacgaaataaagtggggtaagcctgactccgaaaag
ctcctcaaattcctttgcgaagatcacgacttctcgattgacagggtggaaaaagctgca
gaacggcttaaagcagcctcaggagccagacagaggacccttgaccagtggatttga

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