Methanosarcina flavescens: AOB57_011460
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Entry
AOB57_011460 CDS
T05666
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mfz
Methanosarcina flavescens
Pathway
mfz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOB57_011460 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfz03021
]
AOB57_011460 (rpoB)
Enzymes [BR:
mfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOB57_011460 (rpoB)
Transcription machinery [BR:
mfz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AOB57_011460 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DmmA-like_C
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AYK15724
UniProt:
A0A660HTV7
LinkDB
All DBs
Position
complement(2591338..2593152)
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AA seq
604 aa
AA seq
DB search
MTKAKVFINGELVGTHDNPAELVEELRKMRRQGFISRQVNVALNDNTREVIINSDMGRAR
RPLLVVENGALKVTPDHIEKIKNKEINFDDLVKEGCIEYLDAEEEENAYIALYEADITPK
HTHMEIDPELILGISTGMVPYPEHNSSPRNTMGAAMIKQCIGVATANQKLRPDTRAHVLH
YPQRALTSTRTSEAIGFDDRPAGQNFVVAVLSYEGYNIEDALVINRGSVERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSAEAYANLDVDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAVEQRRESSVTMRSNEKGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGEKEEDLREALKRHGFAHTGKEVFYDGTTGKMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVSFCSACGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLNL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaacggggagcttgtcgggacccatgataaccctgca
gagcttgtagaagagctcagaaaaatgaggcggcagggattcatatccagacaggtaaat
gtcgctcttaacgataacacaagagaagtaattataaactctgatatgggcagagcaaga
aggccccttttagttgtggagaacggagctctgaaagtaactcctgatcacatagagaag
attaaaaacaaggagatcaattttgacgacctggtaaaagagggctgtatagagtatctc
gatgccgaggaagaagaaaatgcctatattgcgctctacgaggccgacattaccccaaag
cacacgcacatggagatcgatcccgaacttatattaggtatttctacgggaatggtgcct
tatccggaacacaattcatctccgcgtaacactatgggtgcagccatgatcaagcagtgt
atcggggttgcaactgctaaccagaaactcagacctgatactcgtgcccatgtccttcac
tatcctcaaagggcacttaccagtaccagaacctcggaagcaataggttttgacgacaga
cccgcagggcagaacttcgtggttgcagtcctgtcttatgaaggatataatattgaagac
gccctggttattaacagaggttcagtcgaaagaggtctcgggagaagtcacttcctcagg
acttttgaaggtgaagaaagaaggtatccgggcggacaggaagataagttcgagattccc
gattccgaataccgtggagctcgcagcgcagaagcgtatgctaatctcgatgtcgatgga
cttgtaaacccagagaccccggtcggacctaacgacgtgctgatcggaaagaccagtcct
ccaagattccttgaagaaccgtcagatttcgggattgcggttgagcaaaggagagaaagc
tctgtcaccatgcggtccaacgaaaaaggaattgttgatacggtaattttaaccgagtcc
attaacggaacgagacttgcaaaggtaaaggtaagagacgaaaggattcctgatatagga
gataaattcgcctcaagacacgggcaaaaaggtgttataggtcttaaagtcccgattgca
gatatgccatttacggaatccggtctaacccctgacctgatgattaacccgcatgcaatt
ccctcccgtatgactgtgggtcacgttctggaaatgattggcgggaaagtaggttccatg
gaaggccggagagtaaatgcgacagctttctccggagaaaaagaagaagaccttagagaa
gccctgaaaagacatgggtttgcccatactggaaaagaagttttctacgatggaacgaca
ggtaaaatgattccggcagatgtctttgtgggggttattctctatcagaaactgcaccat
atggttacttccaagatgcatgcaaggtcacgcgggcctgtacaggtgcttactcgccag
ccaaccgaaggccgggccagagaaggtggtctcagattcggagaaatggagcgtgatgtg
ctggtagggcacggagctgccatgtcgttgaaagagaggctgcttgacgaatcggataaa
gttgtggaacttgtctgctctcactgtggaatgattgcaacgtatgacaagcagcggaat
gtttcattctgttcagcctgcggggctgacacggatatatatcctgtggaaatgagctac
gcattcaaactgctgcttgacgaaataaaatcactgggagtcgcacccaggcttaatctt
gaagatgcggtatga
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