Microbacterium galbinum: KV396_02215
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Entry
KV396_02215 CDS
T10384
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgab Microbacterium galbinum
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgab03032
]
KV396_02215 (topA)
03400 DNA repair and recombination proteins [BR:
mgab03400
]
KV396_02215 (topA)
Enzymes [BR:
mgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KV396_02215 (topA)
DNA replication proteins [BR:
mgab03032
]
Prokaryotic type
DNA Topoisomerases
KV396_02215 (topA)
DNA repair and recombination proteins [BR:
mgab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KV396_02215 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UPL13356
LinkDB
All DBs
Position
complement(433175..436021)
Genome browser
AA seq
948 aa
AA seq
DB search
MAEGKKLVIVESPTKMRSIQGYLGDGYEVLSSVGHIRDLADKRDIPAADKEAYGKYSIDI
ENGFDPYYVVSDRKTKTVAELKRALKTADELLLATDEDREGEAIAWHLLETLKPKVPVKR
MVFHEITKDAIQAAVGNTRELDHALVDAQETRRILDRLYGWDVSPVLWYKVKTGISAGRV
QSAATRLIVDRERERMAFVSAEYWDVDAAAAATGTSFRIRLVRVDGGQLARGTDFDDRGA
LKKAVVVLDEAKAHALAQAVESAGAGTVTKVEAKPGTRSPYAPFTTSTMQQEAGRKLSMG
AKQAMSVAQRLYEKGYITYMRTDSTSLSTQAVQAARSQAVALYGDSAVPLKPRVYKSKSK
NAQEAHEAIRPSGDNFRTPASLSSELDRDEQRLYDLIWKRTVASQMADAKYETTTVTIAV
NAAGQVAEFTASGTVYTFKGFLEAYEEGRDEKRGDADAAENQSLPAVAVGDELSVAEAEA
KGHRTTPKPRYTEASLVKVLEEKGIGRPSTFATIPETILDRGYAVKRGQALVPTWLAFSV
VRLLEEHFAELVDYDFTASLEDDLDTIARGEQDRVEWLKGFYFGSDAHVGLRKVVDNLGE
IDARALNSTPITDTATLRFGKYGPYLEVADPENPEAKPRIVNVPEDLAPDELTAEKAQEL
IDAPVAGDRVLGENPENGKIVVVKDGRFGPYVQENDPVSEDAAVDETTGEVVEAPKKRGA
KKETAPKPRTASLFKSMSVDAIDLDTALQLLTLPRVVGVDPESGDEITAQNGRFGPYLKK
GADSRSLESEAQIFDVTLEQALEIYTQPKYGARRASSALAEFDADPVSGKPIRIRDGRFG
AYVTDGETNVTIPRGQKPEDITFEIAVQMLADKRAKGPAPKRGSRAAAKKAPAKKAPAKK
APAKKAPAKKAAAKKAPTDAEKAAARSAAAKKAAATRAANAAAKKAGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaaggcaagaagctcgtcatcgtcgagtctccgacgaagatgcggtctattcag
ggatacctcggagacggctacgaggtgctcagctcggtcggccacatccgcgacctcgcc
gacaagcgggacatcccggccgccgacaaggaggcctacgggaagtactcgatcgacatc
gagaacggcttcgacccctactacgtcgtctccgatcgcaagacgaagacggtcgccgaa
ctcaagcgcgccctgaagaccgccgacgagctcctgctcgccactgatgaggaccgcgag
ggcgaggcgatcgcctggcacctgctcgagaccctcaagcccaaggtccccgtcaagcgc
atggtcttccacgagatcaccaaggacgctatccaggcagccgtcggcaacacccgcgag
ctcgaccacgcgctcgtcgatgcgcaggagacccgccgcatcctcgaccgcctgtacggc
tgggatgtctcgcccgtcctctggtacaaggtcaagaccggcatctcggccggccgcgta
cagtccgctgccacccgtctgatcgtcgaccgggaacgcgagcgcatggcgttcgtctcg
gccgagtactgggacgtcgacgccgctgcggccgcgaccggaacgtcgttccgcatccgt
ctcgtgcgcgtcgacggcgggcagctcgcccgcggcaccgacttcgacgaccgcggtgcc
ctgaagaaggccgtcgtcgtcctcgacgaggccaaggcacacgccctcgcccaggcggtc
gaatcggccggcgccgggacggtgacgaaggtcgaggccaagcccggcacccgcagcccc
tacgccccgttcaccacctccacgatgcagcaggaggcggggcgcaagctctcgatgggg
gcgaagcaggcgatgagcgtcgcgcagcgcctctacgagaaggggtacatcacctatatg
cgtaccgactccacgtcgctgagcacccaggcggtgcaggcggcgcggagccaggcggtc
gcgctctacggcgactccgcggtgccgctcaagccccgcgtgtacaagtcgaagagcaag
aacgcgcaggaggcgcacgaggcgatccgtccctcgggcgacaacttccgcacccccgcg
tcgctctcgtccgagctcgaccgcgacgaacagcgcctctacgacctgatctggaagcgc
accgtcgccagccagatggccgacgcgaagtacgagacgacgaccgtcacgatcgcggtg
aacgccgccgggcaggtcgcggagttcacggcatccggaaccgtctacaccttcaagggc
ttcctcgaggcgtacgaagagggtcgcgacgagaagcgcggcgatgcggatgccgccgag
aaccagtcgctcccggccgtcgccgtgggcgatgagctgtcggtcgccgaagccgaggcc
aaggggcaccgcacgacgccgaagccgcggtacaccgaggcatcgctcgtcaaggtgctc
gaggagaagggcatcgggcgtccgtcgacgttcgcgacgatccccgagacgatcctcgat
cgcggctacgcggtcaagcgcggccaggcgctcgtgccgacgtggctcgccttcagcgtc
gtccgcctgctcgaagagcacttcgccgagctggtcgactacgacttcacggcctcgctc
gaggacgacctcgacacgatcgcacgcggcgagcaggaccgcgtcgagtggctgaagggc
ttctacttcggttccgacgcgcacgtcggcctgcgcaaggtcgtcgacaacctcggcgag
atcgatgcgcgagcgctcaactcgacgccgatcaccgacaccgcgaccctgcgtttcggc
aagtacggcccctacctcgaggtcgccgaccccgagaaccccgaggccaagccgcgcatc
gtcaacgttccggaagacctcgcgcccgacgagctcacggccgagaaggcgcaggagctc
atcgacgctccggtcgccggcgaccgcgtgctcggagagaaccccgagaacggcaagatc
gtcgtcgtcaaggacggacgcttcggcccgtacgtgcaggagaacgacccggtgtccgag
gacgccgcggtcgacgagacgaccggtgaggtcgtcgaagctccgaagaagcgcggtgcc
aagaaggagaccgcgcccaagccgcgcaccgcatcgctcttcaagtcgatgtcggtcgac
gcgatcgatctcgacaccgccctgcagttgctcaccctgcctcgcgtcgtcggcgtcgac
cccgaatcaggcgacgagatcaccgcccagaacggccgcttcggtccgtacctgaagaag
ggcgccgattcgcgctcgctcgagagcgaagcgcagatcttcgacgtgactctcgagcag
gcgctcgagatctacacgcagcccaagtacggtgcccgacgggcatccagcgcgctcgcc
gagttcgacgccgacccggtcagtggcaagccgatccgcattcgtgacggtcgattcggc
gcctacgtgaccgacggggagaccaacgtcacgatcccgcgcggccagaagcccgaggac
attacgttcgagatcgccgtgcagatgctcgccgacaagcgcgcgaagggccccgctccc
aagcgcggctcgcgtgcggcggccaagaaggctccggccaagaaggcgccggccaagaag
gctcctgccaagaaggcaccggcgaagaaggctgcagcgaagaaggctccgacggatgcc
gagaaggcggcggcacgctcggctgcggcgaagaaggcggccgcgacgcgcgccgcgaac
gccgccgcgaagaaggccggttcgtga
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