Microbacterium galbinum: KV396_10565
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Entry
KV396_10565 CDS
T10384
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mgab Microbacterium galbinum
Pathway
mgab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KV396_10565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgab03021
]
KV396_10565
03400 DNA repair and recombination proteins [BR:
mgab03400
]
KV396_10565
Enzymes [BR:
mgab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KV396_10565
Transcription machinery [BR:
mgab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KV396_10565
DNA repair and recombination proteins [BR:
mgab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KV396_10565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UPL14899
UniProt:
A0ABY4IQ19
LinkDB
All DBs
Position
2175944..2179444
Genome browser
AA seq
1166 aa
AA seq
DB search
MAAARNASTSTTTKNGRGASRLSFAKISDTLTVPDLLALQTESFGWLVGNDDWKARVAEA
KKAGRTDVNEISGLGEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAP
LYVEAEFMNHLTGEIKTQTVFMGDFPLQTGKGTFIINGSERVVVSQLVRSPGVYFDKTPD
KTSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGMTSEEILAEF
AGFTSIEETLAKDTIVTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVG
RYKINHKLGLDAPLTDSVLTVEDIVATIKYLVRIHAGTETFSGIRGGKKAEIRLATDDID
NFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFF
GTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEG
PNIGLIGALATFARINSFGFIETPYRKVEGGVVTDQIDYLTASEEVDFNIAQANAPLDAK
GRFRESHVLARPKGGSGEVDLFLPEEIGYIDVSPRQMVSVATSLVPFLEHDDAQRALMGA
NMQRQAVPLLRSDSPLVGTGMEGYTAIDAGDVITAEKAGVVSEVSADRVVVMLDEGGTQE
YHLRKFDRSNQGTSYNQKVVVTAGERIEVGEVIADGPATENGELALGKNLLVAFMTWEGY
NFEDAIILSQDLVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLKDLDERGI
IRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIA
VKEFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPIEDMPFLA
DGTPVDIVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGTPEWAVRLPEQAFEAAPGTK
VATPVFDGASEEEISGLLDSTLPTRDGVRLIDSTGKTQLFDGRSGEPFPAPISVGYMYIL
KLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTI
KSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTLVNLRDTD
DEAFRAAEELGINISSRFEAASIDEI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgctcgcaacgcatccacatccaccaccaccaagaacggacgcggagcttcc
cgcctctcgttcgccaagatctccgacacgctgacggtccccgaccttctcgccctccag
accgagtccttcggctggctcgtcggtaacgacgactggaaggcccgcgtggccgaggcc
aagaaggccggccgcaccgacgtcaacgagatcagcggtctcggcgagatcttcgaggag
atctccccgatcgaggacctcggcgagacgatgcagctctcgttcacgaacccgtacctc
gagcccgagaagtactcgatcgaggagtgcaaggagcgtggcaagacctacgccgctccg
ctgtacgtcgaggccgagttcatgaaccacctcaccggtgagatcaagacccagacggtc
ttcatgggcgacttcccgctccagaccggcaagggcacgttcatcatcaacggctccgag
cgcgtcgtcgtctcgcagctggtgcgttcgcccggtgtctacttcgacaagacgcccgac
aagacgtccgacaaggacatcgtctcggcgcgcgtgatcccgagccgtggtgcatggctc
gagttcgagatcgacaagcgcgaccaggtcggtgtgcgcatcgaccgcaagcgcaagcag
tcggtgaccgtcttcctcaaggccctcggcatgacgagcgaagagatcctggcggagttc
gccggcttcacctcgatcgaggagacgctcgcgaaggacaccatcgtcacgaaggaagat
gcgctccgcgacatctaccgcaagctgcgtccgggcgagcaggtcgccgccgaggccgcc
cgcgcgctcctcgacaacttctacttcaacccgaagcgctacgacctggcgaaggtgggt
cgttacaagatcaaccacaagctcggtctcgacgcgccgctgacggactcggtcctcacg
gtcgaagacatcgtcgcgacgatcaagtacctcgtgcgcatccacgcgggcaccgagacc
ttctcgggcatccgcggcggcaagaaggccgagatccgtctcgcgaccgacgacatcgac
aacttcggcaaccgtcgcatccgcgcggtcggcgagctgatccagaaccaggtccgcacc
ggtctgtcgcgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgaggcg
atcacgccgcagaccctgatcaacgtgcgccccgtcgtcgccgcgatcaaggagttcttc
ggaacgtcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgaccaac
aagcgtcgtctctcggcgctcggcccgggtggtctctcgcgtgaccgcgccggcgtcgag
gtccgtgacgtccacccgtcgcactacgggcgcatgtgcccgatcgagaccccggaaggc
ccgaacatcggtctgatcggtgctctcgcgacgttcgcgcgcatcaactcgttcggtttc
atcgagaccccgtaccgcaaggtcgagggtggcgtcgtcaccgaccagatcgactacctc
acggcttccgaagaggtcgacttcaacatcgcgcaggccaacgccccgctcgatgccaag
ggtcgcttccgcgagagccacgtcctcgcgcgccccaagggcggtagcggtgaggtcgac
ctcttcctcccggaggagatcggctacatcgacgtctcgccgcgccagatggtgtcggtc
gcgacctcgctcgtgcccttcctcgagcacgacgacgcgcagcgcgccctcatgggtgcc
aacatgcagcgtcaggccgtgccgctgctgcgcagcgactcgccgctcgtcggaaccggt
atggagggctacacggccatcgacgccggtgacgtgatcaccgccgagaaggccggtgtc
gtctccgaggtctccgcggaccgcgtcgtcgtcatgctcgacgagggcggcacgcaggag
taccacctgcgcaagttcgaccgctccaaccagggcacctcctacaaccagaaggtcgtc
gtcactgccggcgagcgcatcgaggtcggagaggtcatcgccgatggccccgccaccgag
aacggcgagctggccctcggaaagaacctcctcgtcgcgttcatgacgtgggagggctac
aacttcgaggacgcgatcatcctgagccaggacctggtgaaggacgacaccctctcctcg
attcacatcgaggagtacgaggtcgacgcgcgcgacaccaagctcggcaaggaggagatc
acccgtgacctccccaacgtcagcccggagctgctcaaggacctcgacgagcgcggcatc
atccgcatcggtgccgaggttcgccccggcgacatcctcgtcggcaaggtcactccgaag
ggcgagaccgagctgtcggccgaggagcgtctgctccgcgcgatcttcaacgagaagagc
cgcgaggtccgcgatacgtcgctgaaggttccccacggtgagcagggcacgatcatcgcc
gtcaaggagttcaacgccgaggacggcgacgacgagctcggctcgggcgtcaaccgccgc
gtcgtggtctacatcgcccagaagcgcaagatcaccgagggtgacaagctcgccggccgt
cacggcaacaagggtgtcatcgcgaagatcctcccgatcgaggacatgccgttcctcgcg
gacggaacgccggtcgacatcgtcctgaacccgctcggcatccctggccgaatgaacttc
ggccaggtgctggagacccacctcgggtggatcgccaagcagggctggaaggtcgagggc
acccccgagtgggccgtgcgtctgccggagcaggctttcgaggccgctcccggtacgaag
gtcgcgaccccggtgttcgacggcgcgtcggaggaggagatctccggtctcctcgactcg
acgctcccgacgcgcgacggcgttcgcctgatcgactcgaccggaaagacgcagctgttc
gacggccgctccggtgagccgttcccggcgccgatctcggtgggctacatgtacatcctg
aagctgcaccacctggtcgacgacaagatccacgcacgttccacgggtccgtactcgatg
atcacccagcagccgctcggtggtaaggcgcagttcggtggacagcgcttcggtgagatg
gaggtgtgggccctcgaggcctacggcgccgcgtacgcccttcaggagctcctcacgatc
aagtccgacgacatcctcggccgcgtcaaggtctacgaggcgatcgtcaagggcgagaac
atccaggagcccggcatccccgagtcgttcaaggtgctcatgaaggagatgcagtcgctc
tgcctgaacgtcgaggtcctctcggccgacggcacgctggtcaacctccgcgacaccgac
gacgaggcgttccgcgccgcggaagagctcggtatcaacatctccagccgcttcgaggcc
gcctcgatcgacgagatctaa
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