Microbacterium galbinum: KV396_11480
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Entry
KV396_11480 CDS
T10384
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgab Microbacterium galbinum
Pathway
mgab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KV396_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgab03400
]
KV396_11480
Enzymes [BR:
mgab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KV396_11480
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KV396_11480
DNA repair and recombination proteins [BR:
mgab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KV396_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
TniQ
Ribosomal_S13
DUF7573
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UPL15063
LinkDB
All DBs
Position
complement(2380568..2381431)
Genome browser
AA seq
287 aa
AA seq
DB search
MPEMPEVQGLVDFLGERVVGRTITRTSVAAIAALKTYDPPNTALHGAVISGASRRGKFIV
LSCGDDLHLVFHLAKAGWLRWYETLPTTIIKPGKTPIALRVALDDGSGFDLTEAGTKKSL
AVYVVRDPAEVPGIARLGPDPLDDAFTREVFAGLLDGKRTQIKGLLRDQAVIAGIGNAYS
DEILHAARMSPYAIAATLDDAAIDSLFAAMQATLREALAEASGKPPAELKDAKRRGMQVH
ARRGETCPVCGDTVRSVFFADRSLEYCPTCQTGGKMLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccggaggtgcaggggctcgtcgacttcctgggcgagcgcgtcgtgggg
cgcacgatcacgcgcacgagcgtggcggcgatcgccgcgctgaagacctacgacccgccc
aacaccgcgctgcacggcgccgtgatcagcggcgcctcgcggcggggcaagttcatcgtg
ctctcgtgcggagacgatcttcacctcgtcttccacctcgcgaaggcgggctggctgcga
tggtacgagaccctgcccacgacgataatcaagcccggcaagacgccgatcgccctgcgc
gtcgcgctcgacgacggcagcgggttcgacctcaccgaggcgggcacgaagaagtccctc
gcggtctacgtcgtgcgcgacccggcggaggtgccgggcatcgcccgtctcggcccggac
cctctcgacgacgccttcacccgcgaagtgttcgccggtctcctggacggcaagcgcacg
cagatcaagggcctgctgcgcgatcaggcggtgatcgccggcatcggcaacgcgtactcc
gacgagatcctgcacgccgcgcgcatgtcgccgtacgcgatcgccgcgacgctcgacgac
gcggcgatcgactcgctgttcgcggcgatgcaggcgactctgcgcgaggcgctcgccgag
gcatccggcaagcccccggccgagctgaaggacgcgaagcgccgggggatgcaggtgcac
gcccgccgcggcgagacctgcccggtctgcggcgacaccgtgcgcagcgtcttcttcgcc
gaccgctctctcgagtactgcccgacctgccagacgggcggaaagatgctcgccgaccga
cgcctgtcgcgcctgctgaaatga
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