Microbacterium galbinum: KV396_12145
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Entry
KV396_12145 CDS
T10384
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgab Microbacterium galbinum
Pathway
mgab03420
Nucleotide excision repair
mgab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KV396_12145
03430 Mismatch repair
KV396_12145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgab03400
]
KV396_12145
Enzymes [BR:
mgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KV396_12145
DNA repair and recombination proteins [BR:
mgab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KV396_12145
MMR (mismatch excision repair)
Other MMR factors
KV396_12145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UPL15184
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All DBs
Position
2515375..2518878
Genome browser
AA seq
1167 aa
AA seq
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MTGWGGGLGLSATDVAAALGQPSPTPAQQQVIEAPPSPALVVAGAGSGKTETMSGRVVWL
VANGHVRRDEILGLTFTRKAAGELAERIGHRLAVIDEFGRRGLLPHVPEIVATHALRRVE
EAAGGRQRDVVRTHVLDELAGRYGTGWDPTAPRAAEELMIRPRVSTYNAFADGIVREHAA
RIGRDADVAMLSQAASWMLAREVVLRADLPELEGIDYALGTVIDAVQRLAGEALDHRVDL
DEAERLARETALSFEPYRGNGDVEKAAANLLSLPTLAALVREYIAEKGRRGVLDFADQVG
GAYDIVEAAPDVRAELREQHRVVLLDEYQDTSVIQTRFLAELFHDSAVMAVGDPHQSIYG
WRGASADNLYAFSSAFAREQRAQTYSLMTSWRNDRGILDIANRVLEPLQRPGLDVPPLEP
RPGAGSGSVDLRFAFTVDDEAADVARWFVERRAAHDASVAGRPHTGALLFRSKRHMQTFA
AALAAEGVPHRILGLGGLLATPEVVDVVSTLRVVHDPTAGSALIRLLTGPRFGVGVADMA
ALYDLGRTLAERDTSMMPLPEEVRVRLRSSRGADEAVSIVDAVDVVRAVRDDYRLLEGFT
PDGRSRIRAAGEMLERLRRASSQPLTELLRLIELELRLDIELAANETRGPARVASTQLRA
FSDEVRAFLAADDRGTIGSLLAWLDKAESTDELMPRPEPPEPGVVQLLTIHGSKGLEWDA
VAVVRLVADELPSRVSDTSGWFGFGVVPFALRGDRDALPRFDWDPESAVGGELDPKKRQA
LAQASLSGGATKANPQGGAIKRFKDAYRAYQQQEERRLAYVAVTRARTDLLLSGAHWAGQ
KAPRTPSPFLLEAIDVREHEPIEPVDPDENPYDGPGATISWPLDPLGARRPLVESAAEMV
AGALARPETLIPSEELERLLAERAARLRGIDAAAPTRVPASRFKDYVTDYGGTVSAIIRP
MPERPYRQTRLGTLFHAWVEHRSSLVGVGARVDEALWEIDEDEVGGEIGPAPGEGTGEAA
DAADLAILQATFERSEWGALQPIAVEIEIDFALGAGLADAPADRAGESDAHIVICKLDAV
YRRDDRGGRIEIVDWKTGKPPKGEAERDERMLQLALYRLAYHRRFGVPLDEIDVALYYVA
DDLVIRGDRVYSESELFQRWSAARAAR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggctggggcggcggcctcggcctgtcggcgaccgatgtcgcggcggctctcggc
cagccctcgcccactcccgcgcagcagcaggtgatcgaggcgccgccgtcgcccgccctc
gtcgtcgccggagcgggcagcgggaagaccgagacgatgtcggggcgcgtggtgtggctc
gtcgccaacggtcatgtgcgacgcgacgagatcctcggactcaccttcacccgaaaggct
gcgggcgagctcgccgagcgcatcggccaccgcctcgccgtgatcgacgagttcggtcgc
cgcggtctgctgccgcacgtgccggagatcgtggcgacgcacgccctgcgccgggtggaa
gaggcggccgggggccgtcagcgcgacgtcgtgcggacgcacgtgctcgacgagctcgcc
ggccgctacggcacgggctgggacccgaccgctccgcgtgcggccgaggagctgatgatc
cgcccacgggtgtcgacctacaacgccttcgccgacggcatcgtgcgcgagcacgccgct
cggatcggacgcgacgccgacgtggcgatgctgagtcaggccgcgtcgtggatgctcgcg
cgagaggtcgtgctgcgcgccgacctcccggaactcgaggggatcgactacgcgctcggc
acggtgatcgacgcggtgcagcgcctcgcgggggaggccctcgaccatcgggtcgatctc
gacgaggccgagcgtctcgcgcgcgagacggcgctgtcgttcgagccgtaccgcggcaac
ggcgacgtcgagaaggcggcggcgaaccttctcagcctgccgacgctcgccgcgctcgtg
cgcgagtacatcgccgagaaggggcgccgcggcgtgctcgacttcgccgatcaggtcggt
ggtgcctacgacatcgtcgaggccgctcccgacgtgcgcgccgagctgcgcgagcagcac
cgcgtcgtcctgctcgacgagtatcaggacacctcggtcatccagacccgtttcctcgcc
gagctgttccacgacagcgcggtgatggccgtgggagacccgcaccagtcgatctacggc
tggcgcggcgcgagcgccgacaatctgtacgcgttctcgagcgccttcgcgcgcgaacag
cgggcgcagacgtacagcctcatgaccagctggcgcaacgaccgcggcatcctcgatatc
gccaatcgcgtgctcgagccgctgcagcggccggggctcgacgtgcccccactcgaaccc
cgtcccggtgcgggctccggaagcgtcgatctgcgattcgcgttcacggtcgacgacgag
gccgccgatgtcgctcgctggttcgtcgagcgacgagccgcgcacgatgcatccgtcgcc
ggacgcccgcacaccggcgctctgctgttccgttcgaaacgtcacatgcagaccttcgcg
gccgcgctcgccgcggagggcgtaccgcatcgcatcctcgggctcggcggactgttggcg
acccccgaagtggtcgacgtcgtctccaccctgcgcgtggttcacgacccgaccgcgggt
tcggcactcatccgcctgctcacgggtccgcggttcggcgtcggggtggccgatatggcc
gcgctctacgatctcggccgaaccctcgccgaacgcgacacctcgatgatgccgcttccc
gaagaggtgcgcgtgcgactgcgctcgtcgcgcggcgccgatgaggcggtgtcgatcgtc
gatgccgtcgacgtggtgcgcgccgtgcgcgacgactatcgcctgctggagggattcacc
cccgacgggcgatcgcgcatccgtgcggcgggggagatgctcgagcggctccgacgggcc
tcgtcgcagccgctgaccgagctgctgcgtctgatcgaactcgagctgcgcctcgacatc
gaactggcggcgaacgagacccgggggccggcacgggtcgcctcgacgcagctccgcgcg
ttctccgatgaggtgcgtgccttccttgcggccgacgaccgcggcacgatcggcagtctc
ctcgcctggctcgacaaagcggagagcaccgacgagctcatgccgcgcccggagcccccc
gagccgggcgtggtgcagctgctgacgatccacggatcgaaggggctggagtgggatgcc
gtcgccgtcgtccgtctcgtcgccgacgaactccccagccgggtctccgacacctcgggc
tggttcggcttcggggtcgtgccgttcgcgctccgcggcgaccgcgacgcgctgccgcga
ttcgattgggaccccgagagcgcggtcggcggcgagctcgacccgaagaagcgtcaggct
ctggcgcaggcgtcactgtccggcggggcgaccaaggccaatccccagggcggcgcgatc
aagcgcttcaaggacgcgtaccgcgcctatcagcagcaggaggaacgccggctcgcctac
gtggcggtcacacgcgcgcgcaccgacctgcttctcagtggtgcgcactgggcggggcag
aaggctccccgcacgccgagtcccttcctgctcgaggcgatcgacgtgcgcgagcacgag
cccatcgaaccggtcgatcccgacgagaacccctacgacgggccgggagcgacgatctcg
tggccactggatccgctcggtgcccgccgtccgctcgtcgagtcggcggcggagatggtc
gcgggggctctcgcgcgacccgagacgctgattccctcggaagagctcgagcggctcctc
gccgagcgcgccgcgcgtctgcgtggcatcgacgcagcggcgccgacccgcgtgcccgcc
tcccgtttcaaggactacgtcacggactacggcggaacggtctcggcgatcatccgcccg
atgccggagcgtccgtaccggcagacccgactcggcacgctcttccacgcctgggtcgag
caccggtcatcgctcgtgggcgtcggtgcccgcgtcgacgaggcgctctgggagatcgac
gaggacgaggtgggcggcgagatcgggccggcgccgggagagggaaccggcgaagcggcg
gatgcggccgacctcgccatcctccaggcgacgttcgagcgcagcgagtggggggctctc
cagcccatcgccgtcgagatcgagatcgacttcgcgctcggcgccgggctcgcggatgcc
cccgctgaccgcgccggcgagtccgacgcgcacatcgtgatctgcaagctcgatgccgtg
taccgccgcgacgatcgtggaggccggatcgagatcgtcgactggaagacgggaaagccg
ccgaagggcgaggccgagcgggacgagcggatgctgcagctcgcgctgtaccgtctcgcc
taccaccgccgattcggggtgccgctcgacgagatcgacgtcgcgctctactacgtcgcc
gacgacctcgtcatccgcggagaccgggtctactccgagtccgagctcttccagcgctgg
agcgccgcgcgcgccgcgcgctga
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