Microbacterium galbinum: KV396_13230
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Entry
KV396_13230 CDS
T10384
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mgab Microbacterium galbinum
Pathway
mgab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KV396_13230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgab03019
]
KV396_13230
03016 Transfer RNA biogenesis [BR:
mgab03016
]
KV396_13230
Enzymes [BR:
mgab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KV396_13230
Messenger RNA biogenesis [BR:
mgab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KV396_13230
Transfer RNA biogenesis [BR:
mgab03016
]
Prokaryotic type
tRNA degradation factors
KV396_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_5
Motif
Other DBs
NCBI-ProteinID:
UPL15382
LinkDB
All DBs
Position
2757191..2759467
Genome browser
AA seq
758 aa
AA seq
DB search
MEGPEITATEAVLDNGRFGTRTIRFETGRLAQQAQGAVAAYLDGETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEFYDALAINAASASTQISGLPFSGPVAGVRLAFIPGQGEHADQWVAFPT
AEQVSEAVFDLIVAGRVVTKADGTEDVAIMMVEAEATEGSWNLIKAGATKPDEAVVAQGL
EASKPFIAQLVKAQAELAATASKEPGVYPVFPPYSSEVYDFVAGRAYDELVNVYQIADKT
ERQNADDAIKDRVKAELIAATEAGELPAGAPLEFSGAYKSVTKKIVRGRILTESVRIDGR
GLADIRPLDAEVQVIPRVHGSAIFQRGETQIMGVTTLNMLKMEQQIDSLSPTTSKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALSSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKV
AGTSEFVTAIQLDTKLDGIPSSVLAGALTQARDARLTILNVLNAAIDAPDEMAPTAPRVI
SVQIPVDKIGELIGPKGKTINAIQDETGAQISIEEDGTVYIGATDGPSAEAARAQVNAIA
NPTNPEVGEQFLGTVVKIATFGAFVSLLPGKDGLLHVTEVRKLAGGKRVENVDDVLSVGQ
KILVKITKIDDRGKLSLEPVIDEAPAADAAPAAEAAAE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgaaatcaccgccaccgaggccgttctcgacaacggccgcttcggcacc
cgtaccatccgcttcgagaccggccgcctcgcgcagcaggctcagggcgcagtcgccgcg
tacctcgacggcgagaccatgctcctctcggccaccagcgccggcaagcacccgcgtgag
ggcttcgacttcttcccgctgacggtcgacgtcgaggagcgctcctacgccgccggcaag
atccccggctcgttcttccgtcgcgagggtcgtccctccaccgaggcgatcctggtctgc
cgtctgatcgaccgtccgctgcgtccgtcgttcgtcgacggcctgcgcaacgaggtccag
atcgtcatcacggtcctctcgatcgctccgggagagttctacgacgctctcgcgatcaac
gcggcatccgcgtcgacgcagatctcgggtctcccgttctccggccccgtcgccggtgtg
cgcctggcgttcatccccggccagggcgagcacgccgaccagtgggtcgcgttcccgacg
gccgagcaggtcagcgaggccgtgttcgacctcatcgtcgccggtcgcgtggtcaccaag
gccgacggcaccgaagacgtcgcgatcatgatggtcgaggccgaggcgaccgagggcagc
tggaacctcatcaaggcgggcgccaccaagcccgacgaggccgtcgtcgcccagggcctc
gaggcctcgaagccgttcatcgcgcagctcgtcaaggctcaggccgagctcgccgccacc
gcgtccaaggagccgggcgtgtacccagtcttcccgccgtactcgagcgaggtctacgac
ttcgtcgcgggtcgtgcgtacgacgagctggtgaacgtctaccagatcgccgacaagacc
gagcgccagaacgccgacgacgcgatcaaggaccgcgtcaaggcggagctcatcgcggcg
actgaggctggtgagctgcccgctggcgcacccctcgagttctcgggtgcgtacaagtcg
gtcacgaagaagatcgtccgcggtcgcatcctcaccgagagcgtccgcatcgacggtcgt
ggcctggccgatatccgtccgctcgacgccgaggtgcaggtcatcccgcgcgtgcacggc
tccgcgatcttccagcgcggcgagacccagatcatgggcgtcaccacgctgaacatgctc
aagatggagcagcagatcgactcgctgtcgcccacgacgagcaagcgctacatgcaccac
tacaacttcccgccctactcgaccggtgagaccggccgcgtgggttcgccgaagcgtcgc
gagatcgggcacggcttcctcgccgagcgcgcactcgtgccggtgctgccgagccgcgag
gagttcccctacgcgatccgtcaggtctcggaggcgctcagctccaacggttcgacgtcg
atgggttccgtctgcgcgtcgaccctctcgctgctgaacgcgggtgtgccgctgcgcgcc
cccgtcgccggtatcgcgatgggtctcgtctccgacgaggtcgacggtgagacccgctac
gccgccctcaccgacatcctcggtgcggaggacgcgctcggcgacatggacttcaaggtc
gccggtaccagcgagttcgtcacggcgatccagctcgacacgaagctcgacggcatcccg
tcgtcggtgctcgcgggtgcgctgacccaggcgcgcgacgcgcgtctgacgatcctcaac
gtcctcaacgccgcgatcgacgcgcccgacgagatggcgccgaccgcgccgcgcgtcatc
agcgtccagatcccggtcgacaagatcggcgagctgatcggcccgaagggcaagacgatc
aacgcgatccaggacgagaccggcgcgcagatctccatcgaggaggacggcaccgtctac
atcggcgcgaccgacggcccctcggccgaggccgcccgcgctcaggtcaacgcgatcgcc
aacccgaccaacccggaggtcggcgagcagttcctcggcaccgtcgtgaagatcgccacc
ttcggtgcgttcgtctcgctgctgcccggcaaggacggcctgctgcacgtcaccgaggta
cgcaagctcgccggtggcaagcgcgtcgagaacgtcgacgacgtgctctcggtcggtcag
aagatcctcgtgaagatcacgaagatcgacgaccgcggcaagctctcgctcgagcccgtg
atcgacgaggcccccgcggccgacgccgctccggccgcggaggccgcggccgagtaa
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